Class: AnatomicalEntity

An anatomical structure or system

classDiagram class AnatomicalEntity click AnatomicalEntity href "../AnatomicalEntity/" BiologicalEntity <|-- AnatomicalEntity click BiologicalEntity href "../BiologicalEntity/" AnatomicalEntity : category AnatomicalEntity : description AnatomicalEntity : id AnatomicalEntity : name AnatomicalEntity : uberon_id AnatomicalEntity : xref

Inheritance

NamedThing
- BiologicalEntity
  - AnatomicalEntity

Slots

Name	Cardinality and Range	Description	Inheritance
uberon_id	0..1 Uriorcurie	UBERON anatomical identifier	direct
id	1 Uriorcurie	A unique identifier for a thing	NamedThing
name	0..1 String	A human-readable name for a thing	NamedThing
description	0..1 String	A human-readable description for a thing	NamedThing
category	* String	A category or type for a thing	NamedThing
xref	* Uriorcurie	External database cross-references	NamedThing

Usages

used by	used in	type	used
Disease	affected_anatomy	range	AnatomicalEntity
MolecularInitiatingEvent	occurs_in_anatomy	range	AnatomicalEntity
KeyEvent	occurs_in_anatomy	range	AnatomicalEntity

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/diatomsRcool/exposome-schema

Mappings

Mapping Type	Mapped Value
self	UBERON:0001062
native	exposome_schema:AnatomicalEntity

LinkML Source

Direct

name: AnatomicalEntity
description: An anatomical structure or system
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: BiologicalEntity
slots:
- uberon_id
class_uri: UBERON:0001062

Induced

name: AnatomicalEntity
description: An anatomical structure or system
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: BiologicalEntity
attributes:
  uberon_id:
    name: uberon_id
    description: UBERON anatomical identifier
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: uberon_id
    owner: AnatomicalEntity
    domain_of:
    - AnatomicalEntity
    range: uriorcurie
    pattern: ^UBERON:\d{7}$
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: AnatomicalEntity
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: AnatomicalEntity
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: AnatomicalEntity
    domain_of:
    - NamedThing
    range: string
  category:
    name: category
    description: A category or type for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: category
    owner: AnatomicalEntity
    domain_of:
    - NamedThing
    range: string
    multivalued: true
  xref:
    name: xref
    description: External database cross-references
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: xref
    owner: AnatomicalEntity
    domain_of:
    - NamedThing
    range: uriorcurie
    multivalued: true
class_uri: UBERON:0001062