Class: BiomarkerMeasurement

A measurement of a biological marker

URI: exposome_schema:BiomarkerMeasurement

classDiagram class BiomarkerMeasurement click BiomarkerMeasurement href "../BiomarkerMeasurement/" Measurement <|-- BiomarkerMeasurement click Measurement href "../Measurement/" BiomarkerMeasurement : biomarker_type BiomarkerMeasurement : category BiomarkerMeasurement : description BiomarkerMeasurement : id BiomarkerMeasurement : measured_entity BiomarkerMeasurement --> "0..1" NamedThing : measured_entity click NamedThing href "../NamedThing/" BiomarkerMeasurement : measurement_date BiomarkerMeasurement : measurement_method BiomarkerMeasurement : measurement_unit BiomarkerMeasurement : measurement_value BiomarkerMeasurement : name BiomarkerMeasurement : participant BiomarkerMeasurement --> "0..1" Participant : participant click Participant href "../Participant/" BiomarkerMeasurement : xref

Inheritance

NamedThing
- Measurement
  - BiomarkerMeasurement

Slots

Name	Cardinality and Range	Description	Inheritance
biomarker_type	0..1 String	Type of biomarker	direct
measured_entity	0..1 NamedThing	The entity being measured	direct
participant	0..1 Participant	The participant being measured	direct
measurement_value	0..1 Float	Numeric measurement value	direct
measurement_unit	0..1 String	Unit of measurement	direct
measurement_method	0..1 String	Method used for measurement	direct
measurement_date	0..1 Date	Date of measurement	direct
id	1 Uriorcurie	A unique identifier for a thing	NamedThing
name	0..1 String	A human-readable name for a thing	NamedThing
description	0..1 String	A human-readable description for a thing	NamedThing
category	* String	A category or type for a thing	NamedThing
xref	* Uriorcurie	External database cross-references	NamedThing

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/diatomsRcool/exposome-schema

Mappings

Mapping Type	Mapped Value
self	exposome_schema:BiomarkerMeasurement
native	exposome_schema:BiomarkerMeasurement

LinkML Source

Direct

name: BiomarkerMeasurement
description: A measurement of a biological marker
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: Measurement
slots:
- biomarker_type
- measured_entity
- participant
- measurement_value
- measurement_unit
- measurement_method
- measurement_date

Induced

name: BiomarkerMeasurement
description: A measurement of a biological marker
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: Measurement
attributes:
  biomarker_type:
    name: biomarker_type
    description: Type of biomarker
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: biomarker_type
    owner: BiomarkerMeasurement
    domain_of:
    - BiomarkerMeasurement
    range: string
  measured_entity:
    name: measured_entity
    description: The entity being measured
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measured_entity
    owner: BiomarkerMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - AggregatedMeasurement
    range: NamedThing
  participant:
    name: participant
    description: The participant being measured
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: participant
    owner: BiomarkerMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: Participant
  measurement_value:
    name: measurement_value
    description: Numeric measurement value
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measurement_value
    owner: BiomarkerMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: float
  measurement_unit:
    name: measurement_unit
    description: Unit of measurement
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measurement_unit
    owner: BiomarkerMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: string
  measurement_method:
    name: measurement_method
    description: Method used for measurement
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measurement_method
    owner: BiomarkerMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    range: string
  measurement_date:
    name: measurement_date
    description: Date of measurement
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measurement_date
    owner: BiomarkerMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: date
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: BiomarkerMeasurement
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: BiomarkerMeasurement
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: BiomarkerMeasurement
    domain_of:
    - NamedThing
    range: string
  category:
    name: category
    description: A category or type for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: category
    owner: BiomarkerMeasurement
    domain_of:
    - NamedThing
    range: string
    multivalued: true
  xref:
    name: xref
    description: External database cross-references
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: xref
    owner: BiomarkerMeasurement
    domain_of:
    - NamedThing
    range: uriorcurie
    multivalued: true