Class: MolecularInitiatingEvent

The initial molecular-level perturbation that starts an Adverse Outcome Pathway

classDiagram class MolecularInitiatingEvent click MolecularInitiatingEvent href "../MolecularInitiatingEvent/" BiologicalResponse <|-- MolecularInitiatingEvent click BiologicalResponse href "../BiologicalResponse/" MolecularInitiatingEvent : biological_action MolecularInitiatingEvent : biological_object MolecularInitiatingEvent : biological_process MolecularInitiatingEvent : category MolecularInitiatingEvent : description MolecularInitiatingEvent : id MolecularInitiatingEvent : name MolecularInitiatingEvent : occurs_in_anatomy MolecularInitiatingEvent --> "0..1" AnatomicalEntity : occurs_in_anatomy click AnatomicalEntity href "../AnatomicalEntity/" MolecularInitiatingEvent : occurs_in_cell_type MolecularInitiatingEvent --> "0..1" CellType : occurs_in_cell_type click CellType href "../CellType/" MolecularInitiatingEvent : xref

Inheritance

NamedThing
- BiologicalResponse
  - MolecularInitiatingEvent

Slots

Name	Cardinality and Range	Description	Inheritance
biological_process	0..1 String	Biological process involved	direct
biological_object	0..1 String	Biological object involved	direct
biological_action	0..1 String	Biological action or change	direct
occurs_in_cell_type	0..1 CellType	Cell type where event occurs	direct
occurs_in_anatomy	0..1 AnatomicalEntity	Anatomical location where event occurs	direct
id	1 Uriorcurie	A unique identifier for a thing	NamedThing
name	0..1 String	A human-readable name for a thing	NamedThing
description	0..1 String	A human-readable description for a thing	NamedThing
category	* String	A category or type for a thing	NamedThing
xref	* Uriorcurie	External database cross-references	NamedThing

Usages

used by	used in	type	used
AdverseOutcomePathway	molecular_initiating_event	range	MolecularInitiatingEvent

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/diatomsRcool/exposome-schema

Mappings

Mapping Type	Mapped Value
self	ECTO:3000000
native	exposome_schema:MolecularInitiatingEvent

LinkML Source

Direct

name: MolecularInitiatingEvent
description: The initial molecular-level perturbation that starts an Adverse Outcome
  Pathway
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: BiologicalResponse
slots:
- biological_process
- biological_object
- biological_action
- occurs_in_cell_type
- occurs_in_anatomy
class_uri: ECTO:3000000

Induced

name: MolecularInitiatingEvent
description: The initial molecular-level perturbation that starts an Adverse Outcome
  Pathway
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: BiologicalResponse
attributes:
  biological_process:
    name: biological_process
    description: Biological process involved
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: biological_process
    owner: MolecularInitiatingEvent
    domain_of:
    - MolecularInitiatingEvent
    - KeyEvent
    range: string
  biological_object:
    name: biological_object
    description: Biological object involved
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: biological_object
    owner: MolecularInitiatingEvent
    domain_of:
    - MolecularInitiatingEvent
    - KeyEvent
    range: string
  biological_action:
    name: biological_action
    description: Biological action or change
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: biological_action
    owner: MolecularInitiatingEvent
    domain_of:
    - MolecularInitiatingEvent
    - KeyEvent
    range: string
  occurs_in_cell_type:
    name: occurs_in_cell_type
    description: Cell type where event occurs
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: CL:0000000
    alias: occurs_in_cell_type
    owner: MolecularInitiatingEvent
    domain_of:
    - MolecularInitiatingEvent
    - KeyEvent
    range: CellType
  occurs_in_anatomy:
    name: occurs_in_anatomy
    description: Anatomical location where event occurs
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: UBERON:0001062
    alias: occurs_in_anatomy
    owner: MolecularInitiatingEvent
    domain_of:
    - MolecularInitiatingEvent
    - KeyEvent
    range: AnatomicalEntity
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: MolecularInitiatingEvent
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: MolecularInitiatingEvent
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: MolecularInitiatingEvent
    domain_of:
    - NamedThing
    range: string
  category:
    name: category
    description: A category or type for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: category
    owner: MolecularInitiatingEvent
    domain_of:
    - NamedThing
    range: string
    multivalued: true
  xref:
    name: xref
    description: External database cross-references
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: xref
    owner: MolecularInitiatingEvent
    domain_of:
    - NamedThing
    range: uriorcurie
    multivalued: true
class_uri: ECTO:3000000