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Class: PhenotypeMeasurement

A measurement of a phenotypic trait

URI: exposome_schema:PhenotypeMeasurement

classDiagram class PhenotypeMeasurement click PhenotypeMeasurement href "../PhenotypeMeasurement/" Measurement <|-- PhenotypeMeasurement click Measurement href "../Measurement/" PhenotypeMeasurement : category PhenotypeMeasurement : description PhenotypeMeasurement : id PhenotypeMeasurement : measurement_date PhenotypeMeasurement : measurement_unit PhenotypeMeasurement : measurement_value PhenotypeMeasurement : name PhenotypeMeasurement : participant PhenotypeMeasurement --> "0..1" Participant : participant click Participant href "../Participant/" PhenotypeMeasurement : phenotype PhenotypeMeasurement --> "0..1" Phenotype : phenotype click Phenotype href "../Phenotype/" PhenotypeMeasurement : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
phenotype 0..1
Phenotype
The phenotype being measured direct
participant 0..1
Participant
The participant being measured direct
measurement_value 0..1
Float
Numeric measurement value direct
measurement_unit 0..1
String
Unit of measurement direct
measurement_date 0..1
Date
Date of measurement direct
id 1
Uriorcurie
A unique identifier for a thing NamedThing
name 0..1
String
A human-readable name for a thing NamedThing
description 0..1
String
A human-readable description for a thing NamedThing
category *
String
A category or type for a thing NamedThing
xref *
Uriorcurie
External database cross-references NamedThing

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/diatomsRcool/exposome-schema

Mappings

Mapping Type Mapped Value
self exposome_schema:PhenotypeMeasurement
native exposome_schema:PhenotypeMeasurement

LinkML Source

Direct

name: PhenotypeMeasurement
description: A measurement of a phenotypic trait
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: Measurement
slots:
- phenotype
- participant
- measurement_value
- measurement_unit
- measurement_date

Induced

name: PhenotypeMeasurement
description: A measurement of a phenotypic trait
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: Measurement
attributes:
  phenotype:
    name: phenotype
    description: The phenotype being measured
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: phenotype
    owner: PhenotypeMeasurement
    domain_of:
    - PhenotypeMeasurement
    - ExposureToPhenotypeAssociation
    - GeneticVariantToPhenotypeAssociation
    range: Phenotype
  participant:
    name: participant
    description: The participant being measured
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: participant
    owner: PhenotypeMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: Participant
  measurement_value:
    name: measurement_value
    description: Numeric measurement value
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measurement_value
    owner: PhenotypeMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: float
  measurement_unit:
    name: measurement_unit
    description: Unit of measurement
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measurement_unit
    owner: PhenotypeMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: string
  measurement_date:
    name: measurement_date
    description: Date of measurement
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: measurement_date
    owner: PhenotypeMeasurement
    domain_of:
    - ExposureMeasurement
    - BiomarkerMeasurement
    - PhenotypeMeasurement
    range: date
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: PhenotypeMeasurement
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: PhenotypeMeasurement
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: PhenotypeMeasurement
    domain_of:
    - NamedThing
    range: string
  category:
    name: category
    description: A category or type for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: category
    owner: PhenotypeMeasurement
    domain_of:
    - NamedThing
    range: string
    multivalued: true
  xref:
    name: xref
    description: External database cross-references
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: xref
    owner: PhenotypeMeasurement
    domain_of:
    - NamedThing
    range: uriorcurie
    multivalued: true