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Class: Protein

A protein or polypeptide

URI: exposome_schema:Protein

classDiagram class Protein click Protein href "../Protein/" BiologicalEntity <|-- Protein click BiologicalEntity href "../BiologicalEntity/" Protein : category Protein : description Protein : encoded_by_gene Protein --> "0..1" Gene : encoded_by_gene click Gene href "../Gene/" Protein : id Protein : name Protein : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
encoded_by_gene 0..1
Gene		 Gene that encodes this protein direct
id 1
Uriorcurie		 A unique identifier for a thing NamedThing
name 0..1
String		 A human-readable name for a thing NamedThing
description 0..1
String		 A human-readable description for a thing NamedThing
category *
String		 A category or type for a thing NamedThing
xref *
Uriorcurie		 External database cross-references NamedThing

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/diatomsRcool/exposome-schema

Mappings

Mapping Type Mapped Value
self exposome_schema:Protein
native exposome_schema:Protein

LinkML Source

Direct

name: Protein
description: A protein or polypeptide
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: BiologicalEntity
slots:
- encoded_by_gene

Induced

name: Protein
description: A protein or polypeptide
from_schema: https://w3id.org/diatomsRcool/exposome-schema
is_a: BiologicalEntity
attributes:
  encoded_by_gene:
    name: encoded_by_gene
    description: Gene that encodes this protein
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: encoded_by_gene
    owner: Protein
    domain_of:
    - Protein
    range: Gene
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: Protein
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: Protein
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: Protein
    domain_of:
    - NamedThing
    range: string
  category:
    name: category
    description: A category or type for a thing
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: category
    owner: Protein
    domain_of:
    - NamedThing
    range: string
    multivalued: true
  xref:
    name: xref
    description: External database cross-references
    from_schema: https://w3id.org/diatomsRcool/exposome-schema
    rank: 1000
    alias: xref
    owner: Protein
    domain_of:
    - NamedThing
    range: uriorcurie
    multivalued: true