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Class: ASLHeightMeasurement

Measurement of airway surface liquid height

URI: outcomes_model:ASLHeightMeasurement

classDiagram class ASLHeightMeasurement click ASLHeightMeasurement href "../ASLHeightMeasurement/" Measurement <|-- ASLHeightMeasurement click Measurement href "../Measurement/" ASLHeightMeasurement : asl_height_um ASLHeightMeasurement --> "0..1" QuantityValue : asl_height_um click QuantityValue href "../QuantityValue/" ASLHeightMeasurement : description ASLHeightMeasurement : evaporation_prevention ASLHeightMeasurement --> "0..1" EvaporationControl : evaporation_prevention click EvaporationControl href "../EvaporationControl/" ASLHeightMeasurement : fluorescent_labeling ASLHeightMeasurement --> "0..1" FluorescentLabel : fluorescent_labeling click FluorescentLabel href "../FluorescentLabel/" ASLHeightMeasurement : id ASLHeightMeasurement : imaging_protocol ASLHeightMeasurement --> "0..1" ImagingProtocol : imaging_protocol click ImagingProtocol href "../ImagingProtocol/" ASLHeightMeasurement : input_sample ASLHeightMeasurement --> "0..1" InputSample : input_sample click InputSample href "../InputSample/" ASLHeightMeasurement : ion_composition ASLHeightMeasurement : method_assay ASLHeightMeasurement --> "0..1" Assay : method_assay click Assay href "../Assay/" ASLHeightMeasurement : periciliary_layer_depth ASLHeightMeasurement --> "0..1" QuantityValue : periciliary_layer_depth click QuantityValue href "../QuantityValue/" ASLHeightMeasurement : protocol_notes

Inheritance

Slots

Name Cardinality and Range Description Inheritance
asl_height_um 0..1
QuantityValue		 Airway surface liquid height in micrometers direct
periciliary_layer_depth 0..1
QuantityValue		 Depth of periciliary layer in micrometers direct
imaging_protocol 0..1
ImagingProtocol		 Imaging protocol and parameters direct
ion_composition 0..1
String		 Ionic composition (Cl⁻, Na⁺, K⁺) direct
fluorescent_labeling 0..1
FluorescentLabel		 Fluorescent label or tracer used direct
evaporation_prevention 0..1
EvaporationControl		 Method used to prevent evaporation direct
input_sample 0..1
InputSample		 Description of input samples and manipulations Measurement
method_assay 0..1
Assay		 The method or assay used Measurement
protocol_notes 0..1
String		 Protocol or SOP notes Measurement
id 1
Uriorcurie		 A unique identifier NamedEntity
description 0..1
String		 A detailed description NamedEntity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/outcomes-model

Mappings

Mapping Type Mapped Value
self outcomes_model:ASLHeightMeasurement
native outcomes_model:ASLHeightMeasurement

LinkML Source

Direct

name: ASLHeightMeasurement
description: Measurement of airway surface liquid height
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: Measurement
slots:
- asl_height_um
- periciliary_layer_depth
- imaging_protocol
- ion_composition
- fluorescent_labeling
- evaporation_prevention

Induced

name: ASLHeightMeasurement
description: Measurement of airway surface liquid height
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: Measurement
attributes:
  asl_height_um:
    name: asl_height_um
    description: Airway surface liquid height in micrometers
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: asl_height_um
    owner: ASLHeightMeasurement
    domain_of:
    - ASLHeightMeasurement
    range: QuantityValue
    inlined: true
  periciliary_layer_depth:
    name: periciliary_layer_depth
    description: Depth of periciliary layer in micrometers
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: periciliary_layer_depth
    owner: ASLHeightMeasurement
    domain_of:
    - ASLHeightMeasurement
    range: QuantityValue
    inlined: true
  imaging_protocol:
    name: imaging_protocol
    description: Imaging protocol and parameters
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: imaging_protocol
    owner: ASLHeightMeasurement
    domain_of:
    - CiliaBeatFrequencyMeasurement
    - ASLHeightMeasurement
    range: ImagingProtocol
    inlined: true
  ion_composition:
    name: ion_composition
    description: Ionic composition (Cl⁻, Na⁺, K⁺)
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: ion_composition
    owner: ASLHeightMeasurement
    domain_of:
    - ASLHeightMeasurement
    range: string
  fluorescent_labeling:
    name: fluorescent_labeling
    description: Fluorescent label or tracer used
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: fluorescent_labeling
    owner: ASLHeightMeasurement
    domain_of:
    - ASLHeightMeasurement
    range: FluorescentLabel
    inlined: true
  evaporation_prevention:
    name: evaporation_prevention
    description: Method used to prevent evaporation
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: evaporation_prevention
    owner: ASLHeightMeasurement
    domain_of:
    - ASLHeightMeasurement
    range: EvaporationControl
    inlined: true
  input_sample:
    name: input_sample
    description: Description of input samples and manipulations
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: input_sample
    owner: ASLHeightMeasurement
    domain_of:
    - Measurement
    range: InputSample
  method_assay:
    name: method_assay
    description: The method or assay used
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: method_assay
    owner: ASLHeightMeasurement
    domain_of:
    - Measurement
    range: Assay
  protocol_notes:
    name: protocol_notes
    description: Protocol or SOP notes
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: protocol_notes
    owner: ASLHeightMeasurement
    domain_of:
    - Measurement
    range: string
  id:
    name: id
    description: A unique identifier
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    identifier: true
    alias: id
    owner: ASLHeightMeasurement
    domain_of:
    - NamedEntity
    range: uriorcurie
    required: true
  description:
    name: description
    description: A detailed description
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: description
    owner: ASLHeightMeasurement
    domain_of:
    - NamedEntity
    range: string