Skip to content

Class: InputSample

Description of the biological sample or experimental manipulation used as input

URI: outcomes_model:InputSample

classDiagram class InputSample click InputSample href "../InputSample/" NamedEntity <|-- InputSample click NamedEntity href "../NamedEntity/" InputSample : description InputSample : exposure_conditions InputSample : id InputSample : manipulation InputSample : sample_type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
sample_type 0..1
String		 Type of biological sample direct
manipulation 0..1
String		 Experimental manipulation applied direct
exposure_conditions 0..1
String		 Exposure or treatment conditions direct
id 1
Uriorcurie		 A unique identifier NamedEntity
description 0..1
String		 A detailed description NamedEntity

Usages

used by used in type used
Measurement input_sample range InputSample
CFTRFunctionMeasurement input_sample range InputSample
BALFSputumMeasurement input_sample range InputSample
LungFunctionMeasurement input_sample range InputSample
EGFRSignalingMeasurement input_sample range InputSample
TranscriptionFactorExpressionMeasurement input_sample range InputSample
CiliaBeatFrequencyMeasurement input_sample range InputSample
ASLHeightMeasurement input_sample range InputSample
MucociliaryClearanceMeasurement input_sample range InputSample
GobletCellMeasurement input_sample range InputSample
OxidativeStressMeasurement input_sample range InputSample

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/outcomes-model

Mappings

Mapping Type Mapped Value
self outcomes_model:InputSample
native outcomes_model:InputSample

LinkML Source

Direct

name: InputSample
description: Description of the biological sample or experimental manipulation used
  as input
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: NamedEntity
slots:
- sample_type
- manipulation
- exposure_conditions

Induced

name: InputSample
description: Description of the biological sample or experimental manipulation used
  as input
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: NamedEntity
attributes:
  sample_type:
    name: sample_type
    description: Type of biological sample
    examples:
    - value: Primary human airway epithelial cells at ALI
    - value: MucilAir 3D tissue model
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: sample_type
    owner: InputSample
    domain_of:
    - InputSample
    range: string
  manipulation:
    name: manipulation
    description: Experimental manipulation applied
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: manipulation
    owner: InputSample
    domain_of:
    - InputSample
    range: string
  exposure_conditions:
    name: exposure_conditions
    description: Exposure or treatment conditions
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: exposure_conditions
    owner: InputSample
    domain_of:
    - InputSample
    range: string
  id:
    name: id
    description: A unique identifier
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    identifier: true
    alias: id
    owner: InputSample
    domain_of:
    - NamedEntity
    range: uriorcurie
    required: true
  description:
    name: description
    description: A detailed description
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: description
    owner: InputSample
    domain_of:
    - NamedEntity
    range: string