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Class: LungFunctionMeasurement

Measurement of lung function parameters

URI: outcomes_model:LungFunctionMeasurement

classDiagram class LungFunctionMeasurement click LungFunctionMeasurement href "../LungFunctionMeasurement/" Measurement <|-- LungFunctionMeasurement click Measurement href "../Measurement/" LungFunctionMeasurement : bronchodilator_response LungFunctionMeasurement --> "0..1" QuantityValue : bronchodilator_response click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : decline_rate LungFunctionMeasurement --> "0..1" QuantityValue : decline_rate click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : description LungFunctionMeasurement : dlco LungFunctionMeasurement --> "0..1" QuantityValue : dlco click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : fef25_75 LungFunctionMeasurement --> "0..1" QuantityValue : fef25_75 click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : feno LungFunctionMeasurement --> "0..1" QuantityValue : feno click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : fev1 LungFunctionMeasurement --> "0..1" QuantityValue : fev1 click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : fev1_fvc_ratio LungFunctionMeasurement --> "0..1" QuantityValue : fev1_fvc_ratio click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : fvc LungFunctionMeasurement --> "0..1" QuantityValue : fvc click QuantityValue href "../QuantityValue/" LungFunctionMeasurement : id LungFunctionMeasurement : input_sample LungFunctionMeasurement --> "0..1" InputSample : input_sample click InputSample href "../InputSample/" LungFunctionMeasurement : method_assay LungFunctionMeasurement --> "0..1" Assay : method_assay click Assay href "../Assay/" LungFunctionMeasurement : protocol_notes

Inheritance

Slots

Name Cardinality and Range Description Inheritance
fev1 0..1
QuantityValue		 Forced expiratory volume in 1 second direct
fvc 0..1
QuantityValue		 Forced vital capacity direct
fev1_fvc_ratio 0..1
QuantityValue		 Ratio of FEV1 to FVC direct
fef25_75 0..1
QuantityValue		 Forced expiratory flow 25-75% direct
bronchodilator_response 0..1
QuantityValue		 Response to bronchodilator direct
decline_rate 0..1
QuantityValue		 Longitudinal decline rate direct
dlco 0..1
QuantityValue		 Diffusing capacity of the lung for carbon monoxide direct
feno 0..1
QuantityValue		 Fractional exhaled nitric oxide direct
input_sample 0..1
InputSample		 Description of input samples and manipulations Measurement
method_assay 0..1
Assay		 The method or assay used Measurement
protocol_notes 0..1
String		 Protocol or SOP notes Measurement
id 1
Uriorcurie		 A unique identifier NamedEntity
description 0..1
String		 A detailed description NamedEntity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/outcomes-model

Mappings

Mapping Type Mapped Value
self outcomes_model:LungFunctionMeasurement
native outcomes_model:LungFunctionMeasurement

LinkML Source

Direct

name: LungFunctionMeasurement
description: Measurement of lung function parameters
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: Measurement
slots:
- fev1
- fvc
- fev1_fvc_ratio
- fef25_75
- bronchodilator_response
- decline_rate
- dlco
- feno

Induced

name: LungFunctionMeasurement
description: Measurement of lung function parameters
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: Measurement
attributes:
  fev1:
    name: fev1
    description: Forced expiratory volume in 1 second
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: fev1
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  fvc:
    name: fvc
    description: Forced vital capacity
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: fvc
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  fev1_fvc_ratio:
    name: fev1_fvc_ratio
    description: Ratio of FEV1 to FVC
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: fev1_fvc_ratio
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  fef25_75:
    name: fef25_75
    description: Forced expiratory flow 25-75%
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: fef25_75
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  bronchodilator_response:
    name: bronchodilator_response
    description: Response to bronchodilator
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: bronchodilator_response
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  decline_rate:
    name: decline_rate
    description: Longitudinal decline rate
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: decline_rate
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  dlco:
    name: dlco
    description: Diffusing capacity of the lung for carbon monoxide
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: dlco
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  feno:
    name: feno
    description: Fractional exhaled nitric oxide
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: feno
    owner: LungFunctionMeasurement
    domain_of:
    - LungFunctionMeasurement
    range: QuantityValue
    inlined: true
  input_sample:
    name: input_sample
    description: Description of input samples and manipulations
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: input_sample
    owner: LungFunctionMeasurement
    domain_of:
    - Measurement
    range: InputSample
  method_assay:
    name: method_assay
    description: The method or assay used
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: method_assay
    owner: LungFunctionMeasurement
    domain_of:
    - Measurement
    range: Assay
  protocol_notes:
    name: protocol_notes
    description: Protocol or SOP notes
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: protocol_notes
    owner: LungFunctionMeasurement
    domain_of:
    - Measurement
    range: string
  id:
    name: id
    description: A unique identifier
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    identifier: true
    alias: id
    owner: LungFunctionMeasurement
    domain_of:
    - NamedEntity
    range: uriorcurie
    required: true
  description:
    name: description
    description: A detailed description
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: description
    owner: LungFunctionMeasurement
    domain_of:
    - NamedEntity
    range: string