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Class: Measurement

A generic class representing the process of measuring a biological endpoint.

Includes information about input samples, methods, and contextual metadata.

__

URI: outcomes_model:Measurement

classDiagram class Measurement click Measurement href "../Measurement/" NamedEntity <|-- Measurement click NamedEntity href "../NamedEntity/" Measurement <|-- CFTRFunctionMeasurement click CFTRFunctionMeasurement href "../CFTRFunctionMeasurement/" Measurement <|-- BALFSputumMeasurement click BALFSputumMeasurement href "../BALFSputumMeasurement/" Measurement <|-- LungFunctionMeasurement click LungFunctionMeasurement href "../LungFunctionMeasurement/" Measurement <|-- EGFRSignalingMeasurement click EGFRSignalingMeasurement href "../EGFRSignalingMeasurement/" Measurement <|-- TranscriptionFactorExpressionMeasurement click TranscriptionFactorExpressionMeasurement href "../TranscriptionFactorExpressionMeasurement/" Measurement <|-- CiliaBeatFrequencyMeasurement click CiliaBeatFrequencyMeasurement href "../CiliaBeatFrequencyMeasurement/" Measurement <|-- ASLHeightMeasurement click ASLHeightMeasurement href "../ASLHeightMeasurement/" Measurement <|-- MucociliaryClearanceMeasurement click MucociliaryClearanceMeasurement href "../MucociliaryClearanceMeasurement/" Measurement <|-- GobletCellMeasurement click GobletCellMeasurement href "../GobletCellMeasurement/" Measurement <|-- OxidativeStressMeasurement click OxidativeStressMeasurement href "../OxidativeStressMeasurement/" Measurement : description Measurement : id Measurement : input_sample Measurement --> "0..1" InputSample : input_sample click InputSample href "../InputSample/" Measurement : method_assay Measurement --> "0..1" Assay : method_assay click Assay href "../Assay/" Measurement : protocol_notes

Inheritance

Slots

Name Cardinality and Range Description Inheritance
input_sample 0..1
InputSample		 Description of input samples and manipulations direct
method_assay 0..1
Assay		 The method or assay used direct
protocol_notes 0..1
String		 Protocol or SOP notes direct
id 1
Uriorcurie		 A unique identifier NamedEntity
description 0..1
String		 A detailed description NamedEntity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/outcomes-model

Mappings

Mapping Type Mapped Value
self outcomes_model:Measurement
native outcomes_model:Measurement

LinkML Source

Direct

name: Measurement
description: 'A generic class representing the process of measuring a biological endpoint.

  Includes information about input samples, methods, and contextual metadata.

  '
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: NamedEntity
slots:
- input_sample
- method_assay
- protocol_notes

Induced

name: Measurement
description: 'A generic class representing the process of measuring a biological endpoint.

  Includes information about input samples, methods, and contextual metadata.

  '
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: NamedEntity
attributes:
  input_sample:
    name: input_sample
    description: Description of input samples and manipulations
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: input_sample
    owner: Measurement
    domain_of:
    - Measurement
    range: InputSample
  method_assay:
    name: method_assay
    description: The method or assay used
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: method_assay
    owner: Measurement
    domain_of:
    - Measurement
    range: Assay
  protocol_notes:
    name: protocol_notes
    description: Protocol or SOP notes
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: protocol_notes
    owner: Measurement
    domain_of:
    - Measurement
    range: string
  id:
    name: id
    description: A unique identifier
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    identifier: true
    alias: id
    owner: Measurement
    domain_of:
    - NamedEntity
    range: uriorcurie
    required: true
  description:
    name: description
    description: A detailed description
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: description
    owner: Measurement
    domain_of:
    - NamedEntity
    range: string