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Class: Publication

Any published piece of information, following Biolink model.

Represents scientific evidence supporting research.

__

URI: outcomes_model:Publication

classDiagram class Publication click Publication href "../Publication/" NamedEntity <|-- Publication click NamedEntity href "../NamedEntity/" Publication : authors Publication : description Publication : id Publication : keywords Publication : mesh_terms Publication : pages Publication : publication_type Publication : summary Publication : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
authors *
String
Connects publications to contributor lists, formatted as comma-delimited name... direct
pages 0..1
String
Page numbers (start and end) or total pages direct
summary 0..1
String
Executive summary or abstract of the publication direct
keywords *
String
Keywords or tags for the publication direct
mesh_terms *
String
Medical Subject Headings (MeSH) terms for indexing direct
publication_type 0..1
String
Ontology term for categorizing publication format (e direct
xref *
Uriorcurie
Cross-references to supporting databases or webpages direct
id 1
Uriorcurie
Preferentially a PMID, DOI, or industry-standard identifier (ISBN, ISSN) NamedEntity
description 0..1
String
A detailed description NamedEntity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/outcomes-model

Mappings

Mapping Type Mapped Value
self outcomes_model:Publication
native outcomes_model:Publication

LinkML Source

Direct

name: Publication
description: 'Any published piece of information, following Biolink model.

  Represents scientific evidence supporting research.

  '
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: NamedEntity
slots:
- authors
- pages
- summary
- keywords
- mesh_terms
- publication_type
- xref
slot_usage:
  id:
    name: id
    description: Preferentially a PMID, DOI, or industry-standard identifier (ISBN,
      ISSN)
    examples:
    - value: PMID:12345678
    - value: DOI:10.1234/example

Induced

name: Publication
description: 'Any published piece of information, following Biolink model.

  Represents scientific evidence supporting research.

  '
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
is_a: NamedEntity
slot_usage:
  id:
    name: id
    description: Preferentially a PMID, DOI, or industry-standard identifier (ISBN,
      ISSN)
    examples:
    - value: PMID:12345678
    - value: DOI:10.1234/example
attributes:
  authors:
    name: authors
    description: Connects publications to contributor lists, formatted as comma-delimited
      names
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: authors
    owner: Publication
    domain_of:
    - Publication
    range: string
    multivalued: true
  pages:
    name: pages
    description: Page numbers (start and end) or total pages
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: pages
    owner: Publication
    domain_of:
    - Publication
    range: string
  summary:
    name: summary
    description: Executive summary or abstract of the publication
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: summary
    owner: Publication
    domain_of:
    - Publication
    range: string
  keywords:
    name: keywords
    description: Keywords or tags for the publication
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: keywords
    owner: Publication
    domain_of:
    - Publication
    range: string
    multivalued: true
  mesh_terms:
    name: mesh_terms
    description: Medical Subject Headings (MeSH) terms for indexing
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: mesh_terms
    owner: Publication
    domain_of:
    - Publication
    range: string
    multivalued: true
  publication_type:
    name: publication_type
    description: Ontology term for categorizing publication format (e.g., journal
      article, book chapter, review)
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: publication_type
    owner: Publication
    domain_of:
    - Publication
    range: string
    required: false
  xref:
    name: xref
    description: Cross-references to supporting databases or webpages
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: xref
    owner: Publication
    domain_of:
    - Publication
    range: uriorcurie
    multivalued: true
  id:
    name: id
    description: Preferentially a PMID, DOI, or industry-standard identifier (ISBN,
      ISSN)
    examples:
    - value: PMID:12345678
    - value: DOI:10.1234/example
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    identifier: true
    alias: id
    owner: Publication
    domain_of:
    - NamedEntity
    range: uriorcurie
    required: true
  description:
    name: description
    description: A detailed description
    from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
    rank: 1000
    alias: description
    owner: Publication
    domain_of:
    - NamedEntity
    range: string