Slot: staining_type
Type of staining (histological, immunofluorescence)
URI: outcomes_model:staining_type Alias: staining_type
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| StainingProtocol | Histological or immunofluorescence staining protocol | no |
Properties
- Range: String
Comments
- AB-PAS staining for carbohydrates to assess mucins
- Immunochemical methods for quantification
- Single cell RNA-seq for cell type changes
- For mucin production measurements, include targets for MUC5 (MUC5AC, MUC5B)
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/EHS-Data-Standards/outcomes-model
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | outcomes_model:staining_type |
| native | outcomes_model:staining_type |
| broad | OBI:0302887 |
LinkML Source
name: staining_type
description: Type of staining (histological, immunofluorescence)
comments:
- AB-PAS staining for carbohydrates to assess mucins
- Immunochemical methods for quantification
- Single cell RNA-seq for cell type changes
- For mucin production measurements, include targets for MUC5 (MUC5AC, MUC5B)
from_schema: https://w3id.org/EHS-Data-Standards/outcomes-model
broad_mappings:
- OBI:0302887
rank: 1000
alias: staining_type
domain_of:
- StainingProtocol
range: string