Class: AnatomicalEntityReference

A reference to an anatomical entity from UBERON.

 classDiagram
    class AnatomicalEntityReference
    click AnatomicalEntityReference href "../AnatomicalEntityReference/"
      NamedEntity <|-- AnatomicalEntityReference
        click NamedEntity href "../NamedEntity/"

      AnatomicalEntityReference : id

      AnatomicalEntityReference : name

Inheritance

NamedEntity
- AnatomicalEntityReference

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 Uriorcurie	A unique identifier for the entity	NamedEntity
name	0..1 String	A human-readable name for the entity	NamedEntity

Usages

used by	used in	type	used
CellularSystem	anatomical_origin	range	AnatomicalEntityReference

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

UBERON

Schema Source

from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type	Mapped Value
self	soma:AnatomicalEntityReference
native	soma:AnatomicalEntityReference

LinkML Source

Direct

name: AnatomicalEntityReference
id_prefixes:
- UBERON
description: A reference to an anatomical entity from UBERON.
from_schema: https://w3id.org/EHS-Data-Standards/soma
is_a: NamedEntity
slot_usage:
  id:
    name: id
    pattern: ^UBERON:\d{7}$

Induced

name: AnatomicalEntityReference
id_prefixes:
- UBERON
description: A reference to an anatomical entity from UBERON.
from_schema: https://w3id.org/EHS-Data-Standards/soma
is_a: NamedEntity
slot_usage:
  id:
    name: id
    pattern: ^UBERON:\d{7}$
attributes:
  id:
    name: id
    description: A unique identifier for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    identifier: true
    alias: id
    owner: AnatomicalEntityReference
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: uriorcurie
    required: true
    pattern: ^UBERON:\d{7}$
  name:
    name: name
    description: A human-readable name for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: AnatomicalEntityReference
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: string