Class: AssayOutputMeasurement

The measurement results produced by an assay. The specified output of a planned process. Each domain-specific assay class has a corresponding AssayOutputMeasurement subclass containing the named measurement slots for that assay type. This class represents the "output" in the Input/Process/Output model: what was measured and what values were obtained.

NOTE: this is an abstract class and should not be instantiated directly

URI: soma:AssayOutputMeasurement

 classDiagram
    class AssayOutputMeasurement
    click AssayOutputMeasurement href "../AssayOutputMeasurement/"
      NamedThing <|-- AssayOutputMeasurement
        click NamedThing href "../NamedThing/"


      AssayOutputMeasurement <|-- CiliaryFunctionOutput
        click CiliaryFunctionOutput href "../CiliaryFunctionOutput/"
      AssayOutputMeasurement <|-- ASLOutput
        click ASLOutput href "../ASLOutput/"
      AssayOutputMeasurement <|-- MucociliaryClearanceOutput
        click MucociliaryClearanceOutput href "../MucociliaryClearanceOutput/"
      AssayOutputMeasurement <|-- OxidativeStressOutput
        click OxidativeStressOutput href "../OxidativeStressOutput/"
      AssayOutputMeasurement <|-- CFTRFunctionOutput
        click CFTRFunctionOutput href "../CFTRFunctionOutput/"
      AssayOutputMeasurement <|-- EGFRSignalingOutput
        click EGFRSignalingOutput href "../EGFRSignalingOutput/"
      AssayOutputMeasurement <|-- GobletCellOutput
        click GobletCellOutput href "../GobletCellOutput/"
      AssayOutputMeasurement <|-- BALFSputumOutput
        click BALFSputumOutput href "../BALFSputumOutput/"
      AssayOutputMeasurement <|-- LungFunctionOutput
        click LungFunctionOutput href "../LungFunctionOutput/"
      AssayOutputMeasurement <|-- FoxJExpressionOutput
        click FoxJExpressionOutput href "../FoxJExpressionOutput/"
      AssayOutputMeasurement <|-- GeneExpressionOutput
        click GeneExpressionOutput href "../GeneExpressionOutput/"


      AssayOutputMeasurement : description

      AssayOutputMeasurement : id

      AssayOutputMeasurement : name

Inheritance

NamedThing
- AssayOutputMeasurement

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 Uriorcurie	A unique identifier for the entity	NamedThing
name	0..1 String	A human-readable name for the entity	NamedThing
description	0..1 String	A detailed description of the entity	NamedThing

Usages

used by	used in	type	used
Assay	has_specified_output	range	AssayOutputMeasurement

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type	Mapped Value
self	soma:AssayOutputMeasurement
native	soma:AssayOutputMeasurement
exact	IAO:0000109

LinkML Source

Direct

name: AssayOutputMeasurement
description: 'The measurement results produced by an assay. The specified output of
  a planned process. Each domain-specific assay class has a corresponding AssayOutputMeasurement
  subclass containing the named measurement slots for that assay type. This class
  represents the "output" in the Input/Process/Output model: what was measured and
  what values were obtained.'
from_schema: https://w3id.org/EHS-Data-Standards/soma
exact_mappings:
- IAO:0000109
is_a: NamedThing
abstract: true

Induced

name: AssayOutputMeasurement
description: 'The measurement results produced by an assay. The specified output of
  a planned process. Each domain-specific assay class has a corresponding AssayOutputMeasurement
  subclass containing the named measurement slots for that assay type. This class
  represents the "output" in the Input/Process/Output model: what was measured and
  what values were obtained.'
from_schema: https://w3id.org/EHS-Data-Standards/soma
exact_mappings:
- IAO:0000109
is_a: NamedThing
abstract: true
attributes:
  id:
    name: id
    description: A unique identifier for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    identifier: true
    alias: id
    owner: AssayOutputMeasurement
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: AssayOutputMeasurement
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: string
  description:
    name: description
    description: A detailed description of the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: AssayOutputMeasurement
    domain_of:
    - NamedThing
    range: string