Skip to content

Class: CFTRFunctionOutput

Measurement results from a CFTR function assay. Contains the measured values for CFTR-mediated chloride secretion, forskolin response, and related electrophysiology measurements.

URI: soma:CFTRFunctionOutput

 classDiagram
    class CFTRFunctionOutput
    click CFTRFunctionOutput href "../CFTRFunctionOutput/"
      AssayOutputMeasurement <|-- CFTRFunctionOutput
        click AssayOutputMeasurement href "../AssayOutputMeasurement/"

      CFTRFunctionOutput : cftr_chloride_secretion





        CFTRFunctionOutput --> "0..1" QuantityValue : cftr_chloride_secretion
        click QuantityValue href "../QuantityValue/"



      CFTRFunctionOutput : cftr_forskolin_response





        CFTRFunctionOutput --> "0..1" QuantityValue : cftr_forskolin_response
        click QuantityValue href "../QuantityValue/"



      CFTRFunctionOutput : cftr_specific_current





        CFTRFunctionOutput --> "0..1" QuantityValue : cftr_specific_current
        click QuantityValue href "../QuantityValue/"



      CFTRFunctionOutput : description

      CFTRFunctionOutput : id

      CFTRFunctionOutput : inhibitor_sensitive_current





        CFTRFunctionOutput --> "0..1" QuantityValue : inhibitor_sensitive_current
        click QuantityValue href "../QuantityValue/"



      CFTRFunctionOutput : name

      CFTRFunctionOutput : nasal_potential_difference





        CFTRFunctionOutput --> "0..1" QuantityValue : nasal_potential_difference
        click QuantityValue href "../QuantityValue/"



      CFTRFunctionOutput : sweat_chloride_concentration





        CFTRFunctionOutput --> "0..1" QuantityValue : sweat_chloride_concentration
        click QuantityValue href "../QuantityValue/"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
cftr_chloride_secretion 0..1
QuantityValue		 CFTR-mediated chloride secretion in uA/cm2 direct
cftr_forskolin_response 0..1
QuantityValue		 Forskolin-stimulated CFTR response direct
inhibitor_sensitive_current 0..1
QuantityValue		 Inhibitor-sensitive current measurement direct
cftr_specific_current 0..1
QuantityValue		 CFTR-specific chloride secretory current direct
sweat_chloride_concentration 0..1
QuantityValue		 Sweat chloride concentration in mEq/L (CF diagnostic) direct
nasal_potential_difference 0..1
QuantityValue		 Nasal potential difference in mV direct
id 1
Uriorcurie		 A unique identifier for the entity NamedThing
name 0..1
String		 A human-readable name for the entity NamedThing
description 0..1
String		 A detailed description of the entity NamedThing

Usages

used by used in type used
CFTRFunctionAssay has_specified_output range CFTRFunctionOutput

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type Mapped Value
self soma:CFTRFunctionOutput
native soma:CFTRFunctionOutput

LinkML Source

Direct

name: CFTRFunctionOutput
description: Measurement results from a CFTR function assay. Contains the measured
  values for CFTR-mediated chloride secretion, forskolin response, and related electrophysiology
  measurements.
from_schema: https://w3id.org/EHS-Data-Standards/soma
is_a: AssayOutputMeasurement
slots:
- cftr_chloride_secretion
- cftr_forskolin_response
- inhibitor_sensitive_current
- cftr_specific_current
- sweat_chloride_concentration
- nasal_potential_difference

Induced

name: CFTRFunctionOutput
description: Measurement results from a CFTR function assay. Contains the measured
  values for CFTR-mediated chloride secretion, forskolin response, and related electrophysiology
  measurements.
from_schema: https://w3id.org/EHS-Data-Standards/soma
is_a: AssayOutputMeasurement
attributes:
  cftr_chloride_secretion:
    name: cftr_chloride_secretion
    description: CFTR-mediated chloride secretion in uA/cm2.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: cftr_chloride_secretion
    owner: CFTRFunctionOutput
    domain_of:
    - CFTRFunctionOutput
    range: QuantityValue
    inlined: true
  cftr_forskolin_response:
    name: cftr_forskolin_response
    description: Forskolin-stimulated CFTR response.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: cftr_forskolin_response
    owner: CFTRFunctionOutput
    domain_of:
    - CFTRFunctionOutput
    range: QuantityValue
    inlined: true
  inhibitor_sensitive_current:
    name: inhibitor_sensitive_current
    description: Inhibitor-sensitive current measurement.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: inhibitor_sensitive_current
    owner: CFTRFunctionOutput
    domain_of:
    - CFTRFunctionOutput
    range: QuantityValue
    inlined: true
  cftr_specific_current:
    name: cftr_specific_current
    description: CFTR-specific chloride secretory current.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: cftr_specific_current
    owner: CFTRFunctionOutput
    domain_of:
    - CFTRFunctionOutput
    range: QuantityValue
    inlined: true
  sweat_chloride_concentration:
    name: sweat_chloride_concentration
    description: Sweat chloride concentration in mEq/L (CF diagnostic).
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: sweat_chloride_concentration
    owner: CFTRFunctionOutput
    domain_of:
    - CFTRFunctionOutput
    range: QuantityValue
    inlined: true
  nasal_potential_difference:
    name: nasal_potential_difference
    description: Nasal potential difference in mV.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: nasal_potential_difference
    owner: CFTRFunctionOutput
    domain_of:
    - CFTRFunctionOutput
    range: QuantityValue
    inlined: true
  id:
    name: id
    description: A unique identifier for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    identifier: true
    alias: id
    owner: CFTRFunctionOutput
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: CFTRFunctionOutput
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: string
  description:
    name: description
    description: A detailed description of the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: CFTRFunctionOutput
    domain_of:
    - NamedThing
    range: string