Class: ExposureCondition

A structured description of an exposure or treatment applied to a biological system. Captures what agent was applied, at what concentration, for how long, and when the measurement was taken relative to exposure.

URI: soma:ExposureCondition

 classDiagram
    class ExposureCondition
    click ExposureCondition href "../ExposureCondition/"
      NamedEntity <|-- ExposureCondition
        click NamedEntity href "../NamedEntity/"

      ExposureCondition : exposure_agent





        ExposureCondition --> "0..1" ChemicalEntityReference : exposure_agent
        click ChemicalEntityReference href "../ChemicalEntityReference/"



      ExposureCondition : exposure_concentration





        ExposureCondition --> "0..1" QuantityValue : exposure_concentration
        click QuantityValue href "../QuantityValue/"



      ExposureCondition : exposure_duration





        ExposureCondition --> "0..1" QuantityValue : exposure_duration
        click QuantityValue href "../QuantityValue/"



      ExposureCondition : id

      ExposureCondition : name

      ExposureCondition : timing_post_exposure





        ExposureCondition --> "0..1" QuantityValue : timing_post_exposure
        click QuantityValue href "../QuantityValue/"

Inheritance

NamedEntity
- ExposureCondition

Slots

Name	Cardinality and Range	Description	Inheritance
exposure_agent	0..1 ChemicalEntityReference	The chemical, biological, or environmental agent used for exposure or treatme...	direct
exposure_concentration	0..1 QuantityValue	Concentration of the exposure agent applied	direct
exposure_duration	0..1 QuantityValue	Duration of exposure or treatment	direct
timing_post_exposure	0..1 QuantityValue	Time after exposure when the measurement was taken	direct
id	1 Uriorcurie	A unique identifier for the entity	NamedEntity
name	0..1 String	A human-readable name for the entity	NamedEntity

Usages

used by	used in	type	used
Assay	has_exposure_condition	range	ExposureCondition
CiliaryFunctionAssay	has_exposure_condition	range	ExposureCondition
ASLAssay	has_exposure_condition	range	ExposureCondition
MucociliaryClearanceAssay	has_exposure_condition	range	ExposureCondition
OxidativeStressAssay	has_exposure_condition	range	ExposureCondition
CFTRFunctionAssay	has_exposure_condition	range	ExposureCondition
EGFRSignalingAssay	has_exposure_condition	range	ExposureCondition
GobletCellAssay	has_exposure_condition	range	ExposureCondition
BALFSputumAssay	has_exposure_condition	range	ExposureCondition
LungFunctionAssay	has_exposure_condition	range	ExposureCondition
FoxJExpressionAssay	has_exposure_condition	range	ExposureCondition
GeneExpressionAssay	has_exposure_condition	range	ExposureCondition

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type	Mapped Value
self	soma:ExposureCondition
native	soma:ExposureCondition

LinkML Source

Direct

name: ExposureCondition
description: A structured description of an exposure or treatment applied to a biological
  system. Captures what agent was applied, at what concentration, for how long, and
  when the measurement was taken relative to exposure.
from_schema: https://w3id.org/EHS-Data-Standards/soma
is_a: NamedEntity
slots:
- exposure_agent
- exposure_concentration
- exposure_duration
- timing_post_exposure

Induced

name: ExposureCondition
description: A structured description of an exposure or treatment applied to a biological
  system. Captures what agent was applied, at what concentration, for how long, and
  when the measurement was taken relative to exposure.
from_schema: https://w3id.org/EHS-Data-Standards/soma
is_a: NamedEntity
attributes:
  exposure_agent:
    name: exposure_agent
    description: The chemical, biological, or environmental agent used for exposure
      or treatment. Reference to a CHEBI or ECTO ontology term.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: exposure_agent
    owner: ExposureCondition
    domain_of:
    - ExposureCondition
    range: ChemicalEntityReference
    inlined: true
  exposure_concentration:
    name: exposure_concentration
    description: Concentration of the exposure agent applied.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: exposure_concentration
    owner: ExposureCondition
    domain_of:
    - ExposureCondition
    range: QuantityValue
    inlined: true
  exposure_duration:
    name: exposure_duration
    description: Duration of exposure or treatment.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: exposure_duration
    owner: ExposureCondition
    domain_of:
    - ExposureCondition
    range: QuantityValue
    inlined: true
  timing_post_exposure:
    name: timing_post_exposure
    description: Time after exposure when the measurement was taken. Used to capture
      the temporal relationship between exposure and assay readout.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: timing_post_exposure
    owner: ExposureCondition
    domain_of:
    - ExposureCondition
    range: QuantityValue
    inlined: true
  id:
    name: id
    description: A unique identifier for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    identifier: true
    alias: id
    owner: ExposureCondition
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for the entity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: ExposureCondition
    domain_of:
    - NamedThing
    - Unit
    - NamedEntity
    range: string