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Class: QuantityValue

A quantity with a numeric value and unit of measurement. Used for all measurement values in assays.

URI: soma:QuantityValue

 classDiagram
    class QuantityValue
    click QuantityValue href "../QuantityValue/"
      QuantityValue : unit





        QuantityValue --> "0..1" Unit : unit
        click Unit href "../Unit/"



      QuantityValue : value


Slots

Name Cardinality and Range Description Inheritance
value 0..1
String
The numeric value of the quantity direct
unit 0..1
Unit
The unit of measurement direct

Usages

used by used in type used
InVivoSubject age range QuantityValue
ImagingProtocol imaging_frame_rate range QuantityValue
ImagingProtocol imaging_duration range QuantityValue
ImagingProtocol spatial_resolution range QuantityValue
ImagingProtocol temperature_control range QuantityValue
ImagingProtocol humidity_control range QuantityValue
ImagingProtocol particle_size range QuantityValue
SpirometryProtocol bronchodilator_dose range QuantityValue
ExposureCondition exposure_concentration range QuantityValue
ExposureCondition exposure_duration range QuantityValue
ExposureCondition timing_post_exposure range QuantityValue
CellularSystem confluence_level range QuantityValue
CellularSystem seeding_density range QuantityValue
CellCultureMedium serum_concentration range QuantityValue
CellCultureMedium osmolality range QuantityValue
MediumSupplement concentration range QuantityValue
QuantityRange min_value range QuantityValue
QuantityRange max_value range QuantityValue
CiliaryFunctionOutput beat_frequency_hz range QuantityValue
CiliaryFunctionOutput active_area_percentage range QuantityValue
CiliaryFunctionOutput cilia_length range QuantityValue
CiliaryFunctionOutput cilia_per_cell range QuantityValue
CiliaryFunctionOutput percentage_ciliated_cells range QuantityValue
CiliaryFunctionOutput ciliary_beat_amplitude range QuantityValue
ASLOutput asl_height_um range QuantityValue
ASLOutput periciliary_layer_depth range QuantityValue
ASLOutput mucus_layer_thickness range QuantityValue
ASLOutput asl_ph range QuantityValue
MucociliaryClearanceOutput transport_rate range QuantityValue
MucociliaryClearanceOutput mucus_layer_thickness range QuantityValue
MucociliaryClearanceOutput percentage_active_transport range QuantityValue
MucociliaryClearanceOutput particle_clearance_time range QuantityValue
OxidativeStressOutput reactive_oxygen_species range QuantityValue
OxidativeStressOutput lipid_peroxidation range QuantityValue
OxidativeStressOutput malondialdehyde_level range QuantityValue
OxidativeStressOutput four_hydroxynonenal_level range QuantityValue
OxidativeStressOutput eight_isoprostane_level range QuantityValue
OxidativeStressOutput protein_carbonyl_content range QuantityValue
OxidativeStressOutput nitrotyrosine_level range QuantityValue
OxidativeStressOutput dna_damage_markers range QuantityValue
OxidativeStressOutput eight_ohdg_level range QuantityValue
OxidativeStressOutput antioxidant_capacity range QuantityValue
OxidativeStressOutput glutathione_ratio range QuantityValue
OxidativeStressOutput superoxide_dismutase_activity range QuantityValue
OxidativeStressOutput catalase_activity range QuantityValue
OxidativeStressOutput glutathione_peroxidase_activity range QuantityValue
OxidativeStressOutput total_antioxidant_capacity range QuantityValue
OxidativeStressOutput nrf2_activation range QuantityValue
CFTRFunctionOutput cftr_chloride_secretion range QuantityValue
CFTRFunctionOutput cftr_forskolin_response range QuantityValue
CFTRFunctionOutput inhibitor_sensitive_current range QuantityValue
CFTRFunctionOutput cftr_specific_current range QuantityValue
CFTRFunctionOutput sweat_chloride_concentration range QuantityValue
CFTRFunctionOutput nasal_potential_difference range QuantityValue
EGFRSignalingOutput egfr_phosphorylation_y1068 range QuantityValue
EGFRSignalingOutput egfr_phosphorylation_y1173 range QuantityValue
EGFRSignalingOutput total_egfr_protein range QuantityValue
EGFRSignalingOutput erk_phosphorylation range QuantityValue
EGFRSignalingOutput akt_phosphorylation range QuantityValue
EGFRSignalingOutput egfr_ligand_expression range QuantityValue
EGFRSignalingOutput egfr_membrane_localization range QuantityValue
GobletCellOutput goblet_cell_count range QuantityValue
GobletCellOutput goblet_cell_percentage range QuantityValue
GobletCellOutput muc5ac_mrna_expression range QuantityValue
GobletCellOutput muc5ac_protein_expression range QuantityValue
GobletCellOutput muc5b_mrna_expression range QuantityValue
GobletCellOutput muc5b_protein_expression range QuantityValue
GobletCellOutput muc5ac_muc5b_ratio range QuantityValue
GobletCellOutput mucin_protein_concentration range QuantityValue
GobletCellOutput mucin_secretion_rate range QuantityValue
GobletCellOutput percent_solids range QuantityValue
GobletCellOutput goblet_to_ciliated_ratio range QuantityValue
GobletCellOutput mucus_viscosity range QuantityValue
BALFSputumOutput neutrophil_percentage range QuantityValue
BALFSputumOutput eosinophil_percentage range QuantityValue
BALFSputumOutput macrophage_percentage range QuantityValue
BALFSputumOutput lymphocyte_percentage range QuantityValue
BALFSputumOutput total_cell_count range QuantityValue
BALFSputumOutput il6_concentration range QuantityValue
BALFSputumOutput il8_concentration range QuantityValue
BALFSputumOutput tnf_alpha_concentration range QuantityValue
BALFSputumOutput il1_beta_concentration range QuantityValue
BALFSputumOutput total_protein_concentration range QuantityValue
BALFSputumOutput alpha_diversity range QuantityValue
BALFSputumOutput beta_diversity range QuantityValue
BALFSputumOutput bacterial_load range QuantityValue
BALFSputumOutput cell_free_dna range QuantityValue
LungFunctionAssay hemoglobin_level range QuantityValue
LungFunctionOutput fev1 range QuantityValue
LungFunctionOutput fvc range QuantityValue
LungFunctionOutput fev1_fvc_ratio range QuantityValue
LungFunctionOutput feno range QuantityValue
LungFunctionOutput decline_rate range QuantityValue
LungFunctionOutput bronchodilator_response range QuantityValue
LungFunctionOutput dlco range QuantityValue
LungFunctionOutput peak_expiratory_flow range QuantityValue
LungFunctionOutput fef25_75 range QuantityValue
LungFunctionOutput total_lung_capacity range QuantityValue
LungFunctionOutput functional_residual_capacity range QuantityValue
LungFunctionOutput residual_volume range QuantityValue
LungFunctionOutput lung_compliance range QuantityValue
LungFunctionOutput lung_elastance range QuantityValue
LungFunctionOutput lung_resistance range QuantityValue
FoxJExpressionOutput foxj1_mrna_expression range QuantityValue
FoxJExpressionOutput foxj1_protein_expression range QuantityValue
FoxJExpressionOutput foxj1_positive_cell_percentage range QuantityValue
FoxJExpressionOutput foxj1_nuclear_localization range QuantityValue
GeneExpressionOutput mrna_level range QuantityValue
GeneExpressionOutput protein_level range QuantityValue
GeneExpressionOutput percentage_positive_cells range QuantityValue

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type Mapped Value
self soma:QuantityValue
native soma:QuantityValue

LinkML Source

Direct

name: QuantityValue
description: A quantity with a numeric value and unit of measurement. Used for all
  measurement values in assays.
from_schema: https://w3id.org/EHS-Data-Standards/soma
slots:
- value
- unit

Induced

name: QuantityValue
description: A quantity with a numeric value and unit of measurement. Used for all
  measurement values in assays.
from_schema: https://w3id.org/EHS-Data-Standards/soma
attributes:
  value:
    name: value
    description: The numeric value of the quantity.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: value
    owner: QuantityValue
    domain_of:
    - QuantityValue
    range: string
  unit:
    name: unit
    description: The unit of measurement.
    from_schema: https://w3id.org/EHS-Data-Standards/soma
    rank: 1000
    alias: unit
    owner: QuantityValue
    domain_of:
    - QuantityValue
    - QuantityRange
    range: Unit
    inlined: true