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Slot: description

A detailed description of the entity.

URI: schema:description Alias: description

Applicable Classes

Name Description Modifies Slot
KeyEvent A measurable change in biological state that is a step in an Adverse Outcome ... no
SpirometryProtocol Protocol for lung function / spirometry assays no
OxidativeStressOutput Measurement results from an oxidative stress assay no
CiliaryFunctionOutput Measurement results from a ciliary function assay no
OxidativeStressAssay Assay for measuring oxidative stress markers no
Protocol A detailed set of steps for how to perform a specific assay no
FoxJExpressionOutput Measurement results from a FoxJ1 expression assay no
CFTRFunctionOutput Measurement results from a CFTR function assay no
EGFRSignalingAssay Assay for measuring EGFR phosphorylation and downstream signaling no
EGFRSignalingOutput Measurement results from an EGFR signaling assay no
MolecularInitiatingEvent The initial molecular-level perturbation that starts an Adverse Outcome Pathw... no
ImagingProtocol Protocol for imaging-based assays (CBF, ASL, MCC) no
LungFunctionAssay Clinical assay for measuring lung function no
FoxJExpressionAssay Assay for measuring FoxJ1 expression related to ciliogenesis no
CiliaryFunctionAssay Assay for measuring ciliary function including beat frequency, active area, c... no
GobletCellOutput Measurement results from a goblet cell assay no
BALFSputumOutput Measurement results from a BALF/sputum assay no
Assay A planned process with the objective to produce information about biological ... no
MucociliaryClearanceAssay Assay for measuring mucociliary clearance and transport no
StainingProtocol Protocol for staining-based assays (goblet cell, immunofluorescence) no
AssayOutputMeasurement The measurement results produced by an assay no
MolecularAssayProtocol Protocol for molecular biology assays (qRT-PCR, Western blot, ELISA) no
StudySubject The subject of a study — what the assay is performed on no
NamedThing A generic entity with an identifier and name no
ASLOutput Measurement results from an airway surface liquid assay no
PopulationSubject A population or cohort of subjects studied in aggregate no
MucociliaryClearanceOutput Measurement results from a mucociliary clearance assay no
CellularSystem Cell-based model systems that use living cells to model biological processes no
AdverseOutcome An adverse health outcome at the organism or population level that represents... no
KeyEventRelationship A directional relationship between two key events in an AOP no
CFTRFunctionAssay Assay for measuring CFTR (Cystic Fibrosis Transmembrane Conductance Regulator... no
GeneExpressionAssay General assay for gene expression measurements no
ASLAssay Assay for measuring airway surface liquid properties including ASL height, pe... no
GobletCellAssay Assay for measuring goblet cell populations and mucin production no
GeneExpressionOutput Measurement results from a gene expression assay no
BALFSputumAssay Assay for measuring bronchoalveolar lavage fluid (BALF) or sputum composition no
AdverseOutcomePathway A sequence of causally linked events at different levels of biological organi... no
LungFunctionOutput Measurement results from a lung function assay no
InVivoSubject A living human or animal subject from whom measurements are taken no
ModelSystem An in vitro or ex vivo model system used to study biological processes no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type Mapped Value
self schema:description
native soma:description

LinkML Source

name: description
description: A detailed description of the entity.
from_schema: https://w3id.org/EHS-Data-Standards/soma
rank: 1000
slot_uri: schema:description
alias: description
domain_of:
- NamedThing
range: string