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Slot: study_subject

The subject of the study — what the assay is performed on. Can be a ModelSystem (e.g., CellularSystem), an InVivoSubject, or a PopulationSubject. The type of subject determines which context slots are available.

URI: soma:study_subject Alias: study_subject

Applicable Classes

Name Description Modifies Slot
LungFunctionAssay Clinical assay for measuring lung function yes
GeneExpressionAssay General assay for gene expression measurements no
ASLAssay Assay for measuring airway surface liquid properties including ASL height, pe... no
GobletCellAssay Assay for measuring goblet cell populations and mucin production no
FoxJExpressionAssay Assay for measuring FoxJ1 expression related to ciliogenesis no
CiliaryFunctionAssay Assay for measuring ciliary function including beat frequency, active area, c... yes
OxidativeStressAssay Assay for measuring oxidative stress markers no
EGFRSignalingAssay Assay for measuring EGFR phosphorylation and downstream signaling no
BALFSputumAssay Assay for measuring bronchoalveolar lavage fluid (BALF) or sputum composition yes
Assay A planned process with the objective to produce information about biological ... no
MucociliaryClearanceAssay Assay for measuring mucociliary clearance and transport no
CFTRFunctionAssay Assay for measuring CFTR (Cystic Fibrosis Transmembrane Conductance Regulator... no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type Mapped Value
self soma:study_subject
native soma:study_subject

LinkML Source

name: study_subject
description: The subject of the study — what the assay is performed on. Can be a ModelSystem
  (e.g., CellularSystem), an InVivoSubject, or a PopulationSubject. The type of subject
  determines which context slots are available.
from_schema: https://w3id.org/EHS-Data-Standards/soma
rank: 1000
alias: study_subject
domain_of:
- Assay
range: StudySubject
inlined: true