The Role of Fucoidans Isolated from the Sporophylls of Undaria pinnatifida against Particulate-Matter-Induced Allergic Airway Inflammation: Evidence of the Attenuation of Oxidative Stress and Inflammatory Responses.

Mus musculus fine respirable suspended particulate matterfucoidanprednisone

Study subjects

SUBJECT:herath-mouse-lung-section

Balb/c mouse lung tissue section, PM-exacerbated allergic airway inflammation model

type: InVivoSubject Mus musculus NCBITaxon:10090 sex: female

Female Balb/c mice, 20-25 g, 7-8 weeks old (OrientBio, Sungnam, Korea); n = 7 per group across seven groups

SUBJECT:herath-mouse-lung-homogenate

Balb/c mouse lung homogenate, PM-exacerbated allergic airway inflammation model

type: InVivoSubject Mus musculus NCBITaxon:10090 sex: female

Female Balb/c mice, 20-25 g, 7-8 weeks old (OrientBio, Sungnam, Korea); n = 7 per group across seven groups

SUBJECT:herath-mouse-serum

Balb/c mouse serum, PM-exacerbated allergic airway inflammation model

type: InVivoSubject Mus musculus NCBITaxon:10090 sex: female

Female Balb/c mice, 20-25 g, 7-8 weeks old (OrientBio, Sungnam, Korea); n = 7 per group across seven groups

SUBJECT:herath-mouse-cohort

Balb/c mouse cohort, PM-exacerbated allergic airway inflammation model

type: InVivoSubject Mus musculus NCBITaxon:10090 sex: female

Female Balb/c mice, 20-25 g, 7-8 weeks old (OrientBio, Sungnam, Korea); n = 7 per group across seven groups; airway responsiveness measured 24 h after the final PM challenge with nebulised methacholine at 0, 12.5, 25 and 50 mg/mL

SUBJECT:herath-mouse-balf

Balb/c mouse bronchoalveolar lavage fluid, PM-exacerbated allergic airway inflammation model

type: InVivoSubject Mus musculus NCBITaxon:10090 sex: female

Female Balb/c mice, 20-25 g, 7-8 weeks old (OrientBio, Sungnam, Korea); n = 7 per group across seven groups

SUBJECT:herath-mouse-trachea-section

Balb/c mouse trachea tissue section, PM-exacerbated allergic airway inflammation model

type: InVivoSubject Mus musculus NCBITaxon:10090 sex: female

Female Balb/c mice, 20-25 g, 7-8 weeks old (OrientBio, Sungnam, Korea); n = 7 per group across seven groups

Oxidative stress assays

OX:herath-mda-ihc-lung

MDA positive cell percentage in lung sections (immunohistochemistry)

Malondialdehyde adducts stained by immunohistochemistry on 3 um lung sections and quantified as the MDA positive cell percentage (Figure 1A-H). PM exposure as well as OVA significantly enhanced the MDA positive cell percentage in the PM only, OVA only and OVA + PM groups relative to the healthy control (p < 0.0005), and fucoidans dose-dependently attenuated it relative to OVA + PM. The paper reports this endpoint as images plus a bar chart with no absolute percentages, so no magnitude is recorded; the two directions it states are in response_comparisons without a change value.

ros probe type: anti-malondialdehyde antibody immunohistochemistry (MDA protein adducts)

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control MDA positive cell percentage in lung sections (immunohistochemistry), healthy control
OX:herath-mda-ihc-lung-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated MDA positive cell percentage in lung sections (immunohistochemistry), PM only
OX:herath-mda-ihc-lung-output-pm · under EXPOSURE:herath-pm-only
Significantly enhanced relative to the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated MDA positive cell percentage in lung sections (immunohistochemistry), OVA only
OX:herath-mda-ihc-lung-output-ova · under EXPOSURE:herath-ova-only
Significantly enhanced relative to the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated MDA positive cell percentage in lung sections (immunohistochemistry), OVA + PM
OX:herath-mda-ihc-lung-output-ova-pm · under EXPOSURE:herath-ova-pm
Significantly enhanced relative to the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated MDA positive cell percentage in lung sections (immunohistochemistry), OVA + PM + fucoidans 100 mg/kg
OX:herath-mda-ihc-lung-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Attenuated relative to OVA + PM as part of the dose-dependent response. Reported as a figure bar only; the paper gives no absolute value for this group.
treated MDA positive cell percentage in lung sections (immunohistochemistry), OVA + PM + fucoidans 400 mg/kg
OX:herath-mda-ihc-lung-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Attenuated relative to OVA + PM as part of the dose-dependent response. Reported as a figure bar only; the paper gives no absolute value for this group.
treated MDA positive cell percentage in lung sections (immunohistochemistry), OVA + PM + prednisone 5 mg/kg
OX:herath-mda-ihc-lung-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Positive-control anti-inflammatory drug arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

PM exposure as well as OVA significantly (p < 0.0005) enhanced the MDA positive cell percentage in PM only, OVA only, and OVA + PM compared to a healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

States the increase this assay records in the PM only, OVA only and OVA + PM output records relative to the healthy control.

Fucoidans dose-dependently attenuated the MDA positive cell percentage in the lungs compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

States the dose-dependent reduction recorded in the two fucoidan output records of this assay.

OX:herath-mda-lung-homogenate

Malondialdehyde level in lung homogenate (thiobarbituric acid assay)

MDA measured in lung homogenate supernatant by the thiobarbituric acid reaction read at 532 nm against an MDA standard curve (Figure 1I). PM and OVA each raised lung MDA by about 88-90% over the healthy control (p < 0.05), and fucoidan lowered the PM-exacerbated level dose-dependently, by 51.2% at 100 mg/kg and by 70.4% at 400 mg/kg. The paper states that a high dose of fucoidan was more or similarly effective to prednisone, the positive control. All stated percentages are in response_comparisons; the paper gives no absolute MDA concentrations.

ros probe type: thiobarbituric acid reactive substances (MDA), absorbance at 532 nm

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Malondialdehyde level in lung homogenate (thiobarbituric acid assay), healthy control
OX:herath-mda-lung-homogenate-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in lung homogenate (thiobarbituric acid assay), PM only
OX:herath-mda-lung-homogenate-output-pm · under EXPOSURE:herath-pm-only
MDA increased by 88.4% over the healthy control (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in lung homogenate (thiobarbituric acid assay), OVA only
OX:herath-mda-lung-homogenate-output-ova · under EXPOSURE:herath-ova-only
MDA increased by 88.6% over the healthy control (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in lung homogenate (thiobarbituric acid assay), OVA + PM
OX:herath-mda-lung-homogenate-output-ova-pm · under EXPOSURE:herath-ova-pm
MDA increased by 89.5% over the healthy control (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in lung homogenate (thiobarbituric acid assay), OVA + PM + fucoidans 100 mg/kg
OX:herath-mda-lung-homogenate-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
MDA reduced by 51.2% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in lung homogenate (thiobarbituric acid assay), OVA + PM + fucoidans 400 mg/kg
OX:herath-mda-lung-homogenate-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
MDA reduced by 70.4% relative to OVA + PM (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in lung homogenate (thiobarbituric acid assay), OVA + PM + prednisone 5 mg/kg
OX:herath-mda-lung-homogenate-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states a high dose of fucoidan was more or similarly effective to prednisone at attenuating the PM-exacerbated MDA level. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

PM exposure, as well as OVA, significantly (p < 0.05) enhanced the level of MDA (increased by 88.4% in PM only, by 88.6% in OVA, by 89.5% in OVA + PM) compared with a healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for each of the three exposed output records of this assay against the healthy control.

We observed a 51.2% reduction with low dose (100 mg/kg) fucoidan treatment and a 70.4% reduction (p < 0.05) with high dose (400 mg/kg) fucoidan treatment compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

OX:herath-mda-serum

Malondialdehyde level in serum (lipid peroxidation assay kit)

Serum MDA measured with a colorimetric lipid peroxidation assay kit at the micromolar level against a standard curve (Figure 1J). PM exposure raised serum MDA by 74.6% in both the PM only and the OVA + PM groups relative to the healthy control (both p < 0.005), and fucoidan attenuated the PM-exacerbated level dose-dependently, by 44.8% at 100 mg/kg and by 78.0% at 400 mg/kg (both p < 0.0005). The paper gives no absolute serum MDA concentrations, so the percentages live in response_comparisons.

ros probe type: colorimetric lipid peroxidation (MDA) assay kit

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Malondialdehyde level in serum (lipid peroxidation assay kit), healthy control
OX:herath-mda-serum-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in serum (lipid peroxidation assay kit), PM only
OX:herath-mda-serum-output-pm · under EXPOSURE:herath-pm-only
Serum MDA increased by 74.6% over the healthy control (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in serum (lipid peroxidation assay kit), OVA only
OX:herath-mda-serum-output-ova · under EXPOSURE:herath-ova-only
OVA only arm; the paper states the 74.6% increase for PM only and OVA + PM and gives no percentage for OVA alone in serum. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in serum (lipid peroxidation assay kit), OVA + PM
OX:herath-mda-serum-output-ova-pm · under EXPOSURE:herath-ova-pm
Serum MDA increased by 74.6% over the healthy control (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in serum (lipid peroxidation assay kit), OVA + PM + fucoidans 100 mg/kg
OX:herath-mda-serum-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Serum MDA reduced by 44.8% relative to OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in serum (lipid peroxidation assay kit), OVA + PM + fucoidans 400 mg/kg
OX:herath-mda-serum-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Serum MDA reduced by 78.0% relative to OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Malondialdehyde level in serum (lipid peroxidation assay kit), OVA + PM + prednisone 5 mg/kg
OX:herath-mda-serum-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

We noticed that PM exposure significantly enhanced the MDA level in serum (increased by 74.6% in both PM only and OVA + PM, both p < 0.005) compared with the healthy control (Figure 1J).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the PM only and OVA + PM output records of this assay against the healthy control.

We observed a 44.8% reduction (p < 0.0005) with low-dose (100 mg/kg) fucoidan treatment and a 78.0% reduction (p < 0.0005) with high-dose (400 mg/kg) fucoidan treatment compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

OX:herath-8ohdg-serum

8-OHdG level in serum (DNA/RNA oxidative damage ELISA)

Serum 8-hydroxy-2'-deoxyguanosine measured as the 8-OHdG-acetylcholinesterase conjugate with a DNA/RNA oxidative damage ELISA kit (Figure 1K). 8-OHdG rose significantly over the healthy control in OVA only (81.4%), PM only (122.2%) and OVA + PM (116.8%), all p < 0.005. Fucoidans reduced serum 8-OHdG by 11.8% at both doses but the reduction was not significant, whereas prednisone reduced it by 25.7% (p < 0.05). The authors read this contrast as fucoidans and prednisone attenuating PM-induced oxidative stress through different signalling pathways. No absolute 8-OHdG concentrations are reported.

ros probe type: 8-OHdG-acetylcholinesterase conjugate (DNA/RNA oxidative damage tracer) ELISA

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control 8-OHdG level in serum (DNA/RNA oxidative damage ELISA), healthy control
OX:herath-8ohdg-serum-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated 8-OHdG level in serum (DNA/RNA oxidative damage ELISA), PM only
OX:herath-8ohdg-serum-output-pm · under EXPOSURE:herath-pm-only
Serum 8-OHdG increased by 122.2% over the healthy control (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated 8-OHdG level in serum (DNA/RNA oxidative damage ELISA), OVA only
OX:herath-8ohdg-serum-output-ova · under EXPOSURE:herath-ova-only
Serum 8-OHdG increased by 81.4% over the healthy control (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated 8-OHdG level in serum (DNA/RNA oxidative damage ELISA), OVA + PM
OX:herath-8ohdg-serum-output-ova-pm · under EXPOSURE:herath-ova-pm
Serum 8-OHdG increased by 116.8% over the healthy control (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated 8-OHdG level in serum (DNA/RNA oxidative damage ELISA), OVA + PM + fucoidans 100 mg/kg
OX:herath-8ohdg-serum-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Serum 8-OHdG reduced by 11.8% relative to OVA + PM; not significant. Reported as a figure bar only; the paper gives no absolute value for this group.
treated 8-OHdG level in serum (DNA/RNA oxidative damage ELISA), OVA + PM + fucoidans 400 mg/kg
OX:herath-8ohdg-serum-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Serum 8-OHdG reduced by 11.8% relative to OVA + PM; not significant. Reported as a figure bar only; the paper gives no absolute value for this group.
treated 8-OHdG level in serum (DNA/RNA oxidative damage ELISA), OVA + PM + prednisone 5 mg/kg
OX:herath-8ohdg-serum-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Serum 8-OHdG reduced by 25.7% relative to OVA + PM (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

As in the case of MDA analysis, we observed a significant increase in the serum 8-OHdG level in OVA only (by 81.4%, p < 0.005), PM only (by 122.2%, p < 0.005), and OVA + PM groups (by 116.8%, p < 0.005) compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA only, PM only and OVA + PM output records of this assay against the healthy control.

Although not significant, fucoidans attenuated the 8-OHdG level in serum compared with the OVA + PM group (reduced by 11.8% with both fucoidan doses).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for both fucoidan output records of this assay, and marks it as not statistically significant.

In the meantime, prednisone attenuated the 8-OHdG level in serum by 25.7% (p < 0.05) compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the prednisone output record of this assay against OVA + PM.

Lung function assays

LF:herath-penh-methacholine

Airway resistance (Penh) under methacholine challenge

Enhanced pause (Penh) measured by whole-body plethysmography 24 h after the final PM challenge, with nebulised methacholine at 0, 12.5, 25 and 50 mg/mL and readings averaged over 3 min (Figure 2A). At the high methacholine concentration (50 mg/mL) the PM only, OVA only and OVA + PM groups all showed significantly increased airway hyper-responsiveness over the healthy control (p < 0.0005); PM exacerbated OVA-induced hyper-responsiveness by 20.7% (p < 0.05); and high-dose fucoidans attenuated the PM-exacerbated hyper-responsiveness by 43.0% (p < 0.0005), similarly to prednisone. Penh is a dimensionless plethysmography index rather than a spirometric volume or a measured resistance, and the paper reports it only as figure curves, so no magnitude is recorded in the output records.

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Airway resistance (Penh) under methacholine challenge, healthy control
LF:herath-penh-methacholine-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Figure curve only; the paper gives no numeric Penh value.
treated Airway resistance (Penh) under methacholine challenge, PM only
LF:herath-penh-methacholine-output-pm · under EXPOSURE:herath-pm-only
Significantly increased airway hyper-responsiveness over the healthy control at 50 mg/mL methacholine (p < 0.0005). Figure curve only.
treated Airway resistance (Penh) under methacholine challenge, OVA only
LF:herath-penh-methacholine-output-ova · under EXPOSURE:herath-ova-only
Significantly increased airway hyper-responsiveness over the healthy control at 50 mg/mL methacholine (p < 0.0005). Figure curve only.
treated Airway resistance (Penh) under methacholine challenge, OVA + PM
LF:herath-penh-methacholine-output-ova-pm · under EXPOSURE:herath-ova-pm
Significantly increased over the healthy control, and 20.7% above OVA alone (p < 0.05). Figure curve only.
treated Airway resistance (Penh) under methacholine challenge, OVA + PM + fucoidans 100 mg/kg
LF:herath-penh-methacholine-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the attenuation only for the high dose. Figure curve only.
treated Airway resistance (Penh) under methacholine challenge, OVA + PM + fucoidans 400 mg/kg
LF:herath-penh-methacholine-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Airway hyper-responsiveness attenuated by 43.0% relative to OVA + PM at 50 mg/mL methacholine (p < 0.0005). Figure curve only.
treated Airway resistance (Penh) under methacholine challenge, OVA + PM + prednisone 5 mg/kg
LF:herath-penh-methacholine-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states a high dose of fucoidans was similarly effective to prednisone at attenuating PM-exacerbated airway hyper-responsiveness. Figure curve only.

Evidence

The PM only, OVA only, and OVA + PM groups showed significant (p < 0.0005) increases in airway hyper-responsiveness compared with the healthy control when exposed to a high concentration of methacholine (50 mg/mL).
SUPPORT MODEL ORGANISM PMID:32580518

States the increase in airway hyper-responsiveness recorded in the PM only, OVA only and OVA + PM output records of this assay.

Moreover, PM exacerbated OVA-induced airway hyper-responsiveness (by 20.7%, p < 0.05).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the OVA only group.

More importantly, the group that received a high dose of fucoidans had markedly attenuated (by 43.0%, p < 0.0005) PM-exacerbated airway hyper-responsiveness compared with OVA + PM (with 50 mg/mL methacholine).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the 400 mg/kg fucoidan output record of this assay against OVA + PM.

BALF sputum assays

BALF:herath-inflammatory-cell-differential

Inflammatory cell differential in BALF (Diff Quick)

Differential counts of macrophages, eosinophils, neutrophils, lymphocytes and basophils on methanol-fixed BALF smears stained with a Diff Quick kit (Figure 2B). High-dose fucoidans significantly attenuated the PM-exacerbated infiltration of eosinophils, neutrophils and lymphocytes (p < 0.05), and attenuated neutrophil infiltration more effectively than prednisone did; the macrophage and basophil counts fell dose-dependently but not significantly. The paper reports the counts as figure bars with no numbers, so no magnitude is recorded. The H&E inflammatory activity grade of trachea and lung sections (Figure 3O, 3P) corroborates the same key event but has no assay class in this schema; its result is quoted here as the second evidence item.

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Inflammatory cell differential in BALF (Diff Quick), healthy control
BALF:herath-inflammatory-cell-differential-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Figure bars only; the paper gives no numeric cell counts or percentages.
treated Inflammatory cell differential in BALF (Diff Quick), PM only
BALF:herath-inflammatory-cell-differential-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Figure bars only; the paper gives no numeric cell counts or percentages.
treated Inflammatory cell differential in BALF (Diff Quick), OVA only
BALF:herath-inflammatory-cell-differential-output-ova · under EXPOSURE:herath-ova-only
OVA only arm. Figure bars only; the paper gives no numeric cell counts or percentages.
treated Inflammatory cell differential in BALF (Diff Quick), OVA + PM
BALF:herath-inflammatory-cell-differential-output-ova-pm · under EXPOSURE:herath-ova-pm
PM-exacerbated infiltration of eosinophils, neutrophils, lymphocytes, macrophages and basophils. Figure bars only.
treated Inflammatory cell differential in BALF (Diff Quick), OVA + PM + fucoidans 100 mg/kg
BALF:herath-inflammatory-cell-differential-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Macrophage and basophil counts attenuated dose-dependently but not significantly. Figure bars only.
treated Inflammatory cell differential in BALF (Diff Quick), OVA + PM + fucoidans 400 mg/kg
BALF:herath-inflammatory-cell-differential-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Eosinophil, neutrophil and lymphocyte infiltration significantly attenuated relative to OVA + PM (p < 0.05); macrophage and basophil counts attenuated but not significantly. Figure bars only.
treated Inflammatory cell differential in BALF (Diff Quick), OVA + PM + prednisone 5 mg/kg
BALF:herath-inflammatory-cell-differential-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states that a high dose of fucoidans attenuated neutrophil infiltration more than prednisone did. Figure bars only.

Evidence

Groups that received a high dose of fucoidans had significantly (p < 0.05) attenuated PM-exacerbated infiltration of inflammatory cells; eosinophils, neutrophils, and lymphocytes in BALF.
SUPPORT MODEL ORGANISM PMID:32580518

States the reduction in eosinophils, neutrophils and lymphocytes recorded in the 400 mg/kg fucoidan output record of this assay.

The infiltration of inflammatory cells in the OVA + PM group was higher than that in the healthy control, PM only, and OVA only groups in the trachea as well as in the lungs.
SUPPORT MODEL ORGANISM PMID:32580518

The H&E histopathology result for the same animals, which has no assay class in this schema: it supports the airway inflammation key event this assay informs on, independently of the BALF differential.

Although not significant, the fucoidans dose-dependently attenuated the PM-exacerbated macrophage and basophil counts in BALF.
SUPPORT MODEL ORGANISM PMID:32580518

States the non-significant dose-dependent fall in macrophage and basophil counts recorded in the two fucoidan output records of this assay.

BALF:herath-cytokines

IL-4, IL-17a and IL-33 in BALF (ELISA)

IL-4, IL-17a and IL-33 measured by ELISA in BALF supernatant (Figure 12D-F). IL-4 was significantly increased in OVA + PM over the healthy control (p < 0.05) and high-dose fucoidans attenuated it (p < 0.05); IL-17a was appreciably increased in OVA + PM and attenuated by high-dose fucoidan without reaching significance; IL-33 was significantly increased in OVA + PM and attenuated by high-dose fucoidan. BALFSputumOutput has no IL-4, IL-17a or IL-33 slot and the paper reports the concentrations only as figure bars, so these output records carry their group and condition with no magnitude.

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control IL-4, IL-17a and IL-33 in BALF (ELISA), healthy control
BALF:herath-cytokines-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Figure bars only; the paper gives no numeric cytokine concentrations.
treated IL-4, IL-17a and IL-33 in BALF (ELISA), PM only
BALF:herath-cytokines-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Figure bars only; the paper gives no numeric cytokine concentrations.
treated IL-4, IL-17a and IL-33 in BALF (ELISA), OVA only
BALF:herath-cytokines-output-ova · under EXPOSURE:herath-ova-only
OVA only arm; the paper states that PM exacerbated IL-4 secretion compared with OVA alone. Figure bars only.
treated IL-4, IL-17a and IL-33 in BALF (ELISA), OVA + PM
BALF:herath-cytokines-output-ova-pm · under EXPOSURE:herath-ova-pm
IL-4 significantly increased over the healthy control (p < 0.05); IL-17a appreciably increased; IL-33 significantly increased. Figure bars only.
treated IL-4, IL-17a and IL-33 in BALF (ELISA), OVA + PM + fucoidans 100 mg/kg
BALF:herath-cytokines-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the cytokine attenuation only for the high dose. Figure bars only.
treated IL-4, IL-17a and IL-33 in BALF (ELISA), OVA + PM + fucoidans 400 mg/kg
BALF:herath-cytokines-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
IL-4 attenuated relative to OVA + PM (p < 0.05); IL-17a attenuated but not significantly; IL-33 attenuated. Figure bars only.
treated IL-4, IL-17a and IL-33 in BALF (ELISA), OVA + PM + prednisone 5 mg/kg
BALF:herath-cytokines-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states a high dose of fucoidan was as effective as prednisone at attenuating the PM-exacerbated IL-4 level, and attenuated IL-33 in BALF and the lungs as effectively as prednisone. Figure bars only.

Evidence

The IL-4 level was significantly increased in OVA + PM compared with the healthy control in the serum (Figure 12A, p < 0.005), BALF (Figure 12D, p < 0.05), and lungs (Figure 12G, p < 0.05).
SUPPORT MODEL ORGANISM PMID:32580518

States the IL-4 increase recorded in the OVA + PM output record of this assay, in BALF specifically (p < 0.05).

However, we observed a significant increase in the IL-33 level in BALF (Figure 12F) and in the lungs (Figure 12I) of the OVA + PM group compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

States the IL-33 increase recorded in the OVA + PM output record of this assay.

Treatment with a high dose of fucoidan attenuated the IL-33 level in BALF and the lungs compared with the OVA + PM group.
SUPPORT MODEL ORGANISM PMID:32580518

States the IL-33 reduction recorded in the 400 mg/kg fucoidan output record of this assay.

Goblet cell assays

GCM:herath-pas-trachea

PAS positive cell percentage in trachea sections

Periodic acid-Schiff staining of trachea sections, counterstained with 0.5% methyl green, quantified as the PAS positive cell percentage in ImageJ v1.46 (Figure 10). Goblet cell hyperplasia and mucus secretion increased by 287.5% in OVA + PM relative to the healthy control (p < 0.0005); the PM only and OVA only groups also showed elevated PAS positive cells, but the highest proportion was in OVA + PM. Fucoidan treatments attenuated the PAS positive cell proportion by 9.1% at 100 mg/kg and by 36.7% at 400 mg/kg (p < 0.005). The paper gives no absolute percentages, so the stated changes live in response_comparisons.

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control PAS positive cell percentage in trachea sections, healthy control
GCM:herath-pas-trachea-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in trachea sections, PM only
GCM:herath-pas-trachea-output-pm · under EXPOSURE:herath-pm-only
PAS positive cells elevated compared with the healthy control, below the OVA + PM level. Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in trachea sections, OVA only
GCM:herath-pas-trachea-output-ova · under EXPOSURE:herath-ova-only
PAS positive cells elevated compared with the healthy control, below the OVA + PM level. Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in trachea sections, OVA + PM
GCM:herath-pas-trachea-output-ova-pm · under EXPOSURE:herath-ova-pm
Goblet cell hyperplasia and mucus secretion increased by 287.5% over the healthy control (p < 0.0005); the highest PAS positive cell proportion of all groups. Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in trachea sections, OVA + PM + fucoidans 100 mg/kg
GCM:herath-pas-trachea-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
PAS positive cell proportion attenuated by 9.1% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in trachea sections, OVA + PM + fucoidans 400 mg/kg
GCM:herath-pas-trachea-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
PAS positive cell proportion attenuated by 36.7% relative to OVA + PM (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in trachea sections, OVA + PM + prednisone 5 mg/kg
GCM:herath-pas-trachea-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

PAS staining of the trachea showed significant increases (by 287.5%, p < 0.0005) in goblet cell hyperplasia and mucus secretion in the OVA + PM group compared with the healthy control, confirming the presence of severe airway inflammation.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

However, fucoidan treatments attenuated the PAS positive cell proportion in the trachea compared with the OVA + PM group (by 9.1% with a low dose of fucoidan and by 36.7% with a high dose of fucoidan, p < 0.005).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

GCM:herath-pas-lung

PAS positive cell percentage in lung sections

Periodic acid-Schiff staining of lung sections quantified as the PAS positive cell percentage in ImageJ v1.46 (Figure 10J-P). Mucus secretion and goblet cell hyperplasia increased by 378.0% in OVA + PM relative to the healthy control (p < 0.0005), and PM induced PAS positive cells in the lungs by 49.0% over OVA alone (p < 0.005). Fucoidan treatments reduced the number of PAS positive cells by 35.2% at 100 mg/kg (p < 0.005) and by 66.8% at 400 mg/kg (p < 0.0005). The paper separately reports, without quantification, that PM exposure enhanced mucus secretion with enlarged submucosal mucous glands and that fucoidans dose-dependently reversed both (Figure 11); there is no submucosal-gland slot in this schema, so that observation is recorded here and in the goblet-to-mucin key event relationship rather than as a measurement.

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control PAS positive cell percentage in lung sections, healthy control
GCM:herath-pas-lung-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in lung sections, PM only
GCM:herath-pas-lung-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in lung sections, OVA only
GCM:herath-pas-lung-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 49.0% below the OVA + PM group (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in lung sections, OVA + PM
GCM:herath-pas-lung-output-ova-pm · under EXPOSURE:herath-ova-pm
Mucus secretion and goblet cell hyperplasia increased by 378.0% over the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in lung sections, OVA + PM + fucoidans 100 mg/kg
GCM:herath-pas-lung-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
PAS positive cells reduced by 35.2% relative to OVA + PM (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in lung sections, OVA + PM + fucoidans 400 mg/kg
GCM:herath-pas-lung-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
PAS positive cells reduced by 66.8% relative to OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated PAS positive cell percentage in lung sections, OVA + PM + prednisone 5 mg/kg
GCM:herath-pas-lung-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

In the meantime, PM-challenged and OVA-sensitized mice (OVA + PM group) significantly increased (by 378.0%, p < 0.0005) the secretion of mucus and goblet cell hyperplasia in the lungs compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

PM clearly induced PAS positive cells in the lungs (by 49.0%, p < 0.005) compared with OVA alone (Figure 10J,P).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the OVA only group.

However, interestingly, fucoidan treatments reduced the number of PAS positive cells compared with the OVA + PM group (by 35.2% (p < 0.005) at a low dose and by 66.8% (p < 0.0005) at a high dose, respectively) in the lungs.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

Gene expression assays

GE:herath-eosinophils-trachea

Congo red positive eosinophils in trachea sections

Eosinophils stained with Congo red on trachea sections and counted per site in ImageJ v1.46 (Figure 4A-G, 4O). PM increased eosinophil infiltration in the trachea of OVA-sensitised mice by 500.0% over the healthy control (p < 0.0005), and OVA + PM exceeded OVA alone by 56.4% (p < 0.005). Fucoidan treatments attenuated the PM-exacerbated infiltration dose-dependently, by 52.0% at 100 mg/kg and by 72.0% at 400 mg/kg. The paper reports eosinophil counts only as figure bars, so no magnitude is recorded.

gene expression method: Congo red staining with 0.5% methyl green counterstain; eosinophils per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Congo red positive eosinophils in trachea sections, healthy control
GE:herath-eosinophils-trachea-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in trachea sections, PM only
GE:herath-eosinophils-trachea-output-pm · under EXPOSURE:herath-pm-only
Eosinophil infiltration enhanced over the healthy control, to a lesser level than OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in trachea sections, OVA only
GE:herath-eosinophils-trachea-output-ova · under EXPOSURE:herath-ova-only
Eosinophil infiltration enhanced over the healthy control, 56.4% below OVA + PM (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in trachea sections, OVA + PM
GE:herath-eosinophils-trachea-output-ova-pm · under EXPOSURE:herath-ova-pm
Eosinophil infiltration increased by 500.0% over the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in trachea sections, OVA + PM + fucoidans 100 mg/kg
GE:herath-eosinophils-trachea-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Eosinophil infiltration suppressed by 52.0% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in trachea sections, OVA + PM + fucoidans 400 mg/kg
GE:herath-eosinophils-trachea-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Eosinophil infiltration suppressed by 72.0% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in trachea sections, OVA + PM + prednisone 5 mg/kg
GE:herath-eosinophils-trachea-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone attenuated eosinophil infiltration in the trachea, as expected. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

PM increased eosinophil infiltration in the trachea of OVA-sensitized mice by 500.0% compared with the healthy control (Figure 4A,O; p < 0.0005).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

However, fucoidan treatments clearly attenuated PM-exacerbated eosinophil infiltration in the trachea in a dose response manner compared with the OVA + PM group (suppression by 52.0% and 72.0% for low- and high-dose fucoidan treatments, respectively; Figure 4D,O).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent suppression recorded for the two fucoidan output records of this assay against OVA + PM.

GE:herath-eosinophils-lung

Congo red positive eosinophils in lung sections

Eosinophils stained with Congo red on lung sections and counted per site in ImageJ v1.46 (Figure 4H-N, 4P). The highest infiltration was in OVA + PM: 566.6% above the healthy control (p < 0.0005) and 74.0% above OVA only (p < 0.005). Fucoidan attenuated eosinophil infiltration dose-dependently, by 45.0% at 100 mg/kg and by 65.0% at 400 mg/kg, and the high dose was as effective as prednisone. No absolute counts are reported.

gene expression method: Congo red staining with 0.5% methyl green counterstain; eosinophils per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Congo red positive eosinophils in lung sections, healthy control
GE:herath-eosinophils-lung-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in lung sections, PM only
GE:herath-eosinophils-lung-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in lung sections, OVA only
GE:herath-eosinophils-lung-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 74.0% below OVA + PM (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in lung sections, OVA + PM
GE:herath-eosinophils-lung-output-ova-pm · under EXPOSURE:herath-ova-pm
Eosinophil infiltration increased by 566.6% over the healthy control (p < 0.0005); the highest of all groups. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in lung sections, OVA + PM + fucoidans 100 mg/kg
GE:herath-eosinophils-lung-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Eosinophil infiltration suppressed by 45.0% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in lung sections, OVA + PM + fucoidans 400 mg/kg
GE:herath-eosinophils-lung-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Eosinophil infiltration suppressed by 65.0% relative to OVA + PM; as effective as prednisone. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Congo red positive eosinophils in lung sections, OVA + PM + prednisone 5 mg/kg
GE:herath-eosinophils-lung-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; high-dose fucoidan treatment was as effective as prednisone for attenuating the PM-exacerbated eosinophil count in mouse lungs. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

Similarly, the highest infiltration of eosinophils was observed in the OVA + PM group (Figure 4K,P) in the lungs compared with the healthy control (by 566.6%, p < 0.0005) and with OVA only (74.0%, p < 0.005).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control and against OVA only.

However, fucoidan dose-dependently attenuated eosinophil infiltration in the lungs (suppression by 45.0% and 65.0% for low- and high-dose fucoidan treatments, respectively; Figure 4M,P).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent suppression recorded for the two fucoidan output records of this assay against OVA + PM.

GE:herath-gr1-trachea

Gr-1+ granulocytes in trachea sections (immunohistochemistry)

Gr-1+ granulocytes detected by immunohistochemistry on trachea sections and counted per site in ImageJ v1.46 (Figure 5A-G, 5O). OVA + PM raised the granulocyte influx by 200.0% over the healthy control (p < 0.0005) and PM exacerbated Gr-1+ infiltration by 52.5% over OVA alone. Fucoidan reduced the influx by 36.6% at 100 mg/kg and 53.3% at 400 mg/kg, and prednisone by 55.5%. No absolute counts are reported.

gene expression method: immunohistochemistry with avidin-biotin peroxidase complex and 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Gr-1+ granulocytes in trachea sections (immunohistochemistry), healthy control
GE:herath-gr1-trachea-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in trachea sections (immunohistochemistry), PM only
GE:herath-gr1-trachea-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in trachea sections (immunohistochemistry), OVA only
GE:herath-gr1-trachea-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 52.5% below OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in trachea sections (immunohistochemistry), OVA + PM
GE:herath-gr1-trachea-output-ova-pm · under EXPOSURE:herath-ova-pm
Granulocyte influx enhanced by 200.0% over the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in trachea sections (immunohistochemistry), OVA + PM + fucoidans 100 mg/kg
GE:herath-gr1-trachea-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Gr-1+ cell influx reduced by 36.6% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in trachea sections (immunohistochemistry), OVA + PM + fucoidans 400 mg/kg
GE:herath-gr1-trachea-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Gr-1+ cell influx reduced by 53.3% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in trachea sections (immunohistochemistry), OVA + PM + prednisone 5 mg/kg
GE:herath-gr1-trachea-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Granulocyte influx reduced by 55.5% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

The OVA + PM group (Figure 5D,O) enhanced the influx of granulocytes in the trachea significantly (by 200.0%, p < 0.0005) compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

We observed a 36.6% reduction with low-dose fucoidan treatment (Figure 5E,O) and a 53.3% reduction with high-dose fucoidan treatment (Figure 5F,O) compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

Prednisone also attenuated the granulocyte influx by 55.5% compared with OVA + PM (Figure 5G,O).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the prednisone output record of this assay against OVA + PM.

GE:herath-gr1-lung

Gr-1+ granulocytes in lung sections (immunohistochemistry)

Gr-1+ granulocytes detected by immunohistochemistry on lung sections and counted per site in ImageJ v1.46 (Figure 5H-N, 5P). Granulocyte infiltration rose 247.8% in OVA + PM over the healthy control, and PM exacerbated OVA-induced granulocyte infiltration by 113.3% over OVA alone (p < 0.0005). High-dose fucoidans reduced granulocyte infiltration by 66.4% relative to OVA + PM (p < 0.0005) and were more effective than prednisone. No absolute counts are reported.

gene expression method: immunohistochemistry with avidin-biotin peroxidase complex and 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Gr-1+ granulocytes in lung sections (immunohistochemistry), healthy control
GE:herath-gr1-lung-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in lung sections (immunohistochemistry), PM only
GE:herath-gr1-lung-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in lung sections (immunohistochemistry), OVA only
GE:herath-gr1-lung-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 113.3% below OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in lung sections (immunohistochemistry), OVA + PM
GE:herath-gr1-lung-output-ova-pm · under EXPOSURE:herath-ova-pm
Granulocyte infiltration increased by 247.8% over the healthy control. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in lung sections (immunohistochemistry), OVA + PM + fucoidans 100 mg/kg
GE:herath-gr1-lung-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the significant reduction only for the high dose. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in lung sections (immunohistochemistry), OVA + PM + fucoidans 400 mg/kg
GE:herath-gr1-lung-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Granulocyte infiltration reduced by 66.4% relative to OVA + PM (p < 0.0005); more effective than prednisone. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Gr-1+ granulocytes in lung sections (immunohistochemistry), OVA + PM + prednisone 5 mg/kg
GE:herath-gr1-lung-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states fucoidans were more effective than prednisone at attenuating PM-exacerbated granulocyte infiltration in the lungs. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

We observed a 247.8% increase in granulocyte infiltration in OVA + PM (Figure 5K,P) compared with the healthy control (Figure 5H,P).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

However, when treated with a high dose of fucoidans (Figure 5M,P), there was a significant reduction of granulocytes infiltration in lung compared to OVA + PM (by 66.4%, p < 0.0005).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the 400 mg/kg fucoidan output record of this assay against OVA + PM.

GE:herath-f480-trachea

F4/80+ macrophages in trachea sections (immunohistochemistry)

F4/80+ macrophages detected by immunohistochemistry on trachea sections and counted per site in ImageJ v1.46 (Figure 6A-G, 6O). OVA + PM showed clearly enhanced macrophage infiltration, +250.0% over the healthy control (p < 0.0005). Fucoidans significantly reduced macrophage infiltration relative to OVA + PM, by 34.7% at 100 mg/kg (p < 0.05) and 45.7% at 400 mg/kg (p < 0.0005). No absolute counts are reported.

gene expression method: immunohistochemistry with avidin-biotin peroxidase complex and 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control F4/80+ macrophages in trachea sections (immunohistochemistry), healthy control
GE:herath-f480-trachea-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in trachea sections (immunohistochemistry), PM only
GE:herath-f480-trachea-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in trachea sections (immunohistochemistry), OVA only
GE:herath-f480-trachea-output-ova · under EXPOSURE:herath-ova-only
OVA only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in trachea sections (immunohistochemistry), OVA + PM
GE:herath-f480-trachea-output-ova-pm · under EXPOSURE:herath-ova-pm
Macrophage infiltration enhanced by 250.0% over the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in trachea sections (immunohistochemistry), OVA + PM + fucoidans 100 mg/kg
GE:herath-f480-trachea-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Macrophage infiltration reduced by 34.7% relative to OVA + PM (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in trachea sections (immunohistochemistry), OVA + PM + fucoidans 400 mg/kg
GE:herath-f480-trachea-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Macrophage infiltration reduced by 45.7% relative to OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in trachea sections (immunohistochemistry), OVA + PM + prednisone 5 mg/kg
GE:herath-f480-trachea-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

The OVA + PM group showed clearly enhanced macrophage infiltration in the trachea (+250.0%, p < 0.0005) compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

However, fucoidans significantly reduced macrophage infiltration in the trachea compared with the OVA + PM group (by 34.7%, p < 0.05 at a low dose; by 45.7%, p < 0.0005 at a high dose).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

GE:herath-f480-lung

F4/80+ macrophages in lung sections (immunohistochemistry)

F4/80+ macrophages detected by immunohistochemistry on lung sections and counted per site in ImageJ v1.46 (Figure 6H-N, 6P). Macrophage infiltration rose 515.3% in PM + OVA over the healthy control (p < 0.0005), and PM exacerbated macrophage infiltration by 58.4% over OVA alone. Both fucoidan doses significantly attenuated the PM-exacerbated infiltration, by 74.3% and 81.2% respectively (both p < 0.0005), and the high dose was more or similarly effective to prednisone. No absolute counts are reported.

gene expression method: immunohistochemistry with avidin-biotin peroxidase complex and 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control F4/80+ macrophages in lung sections (immunohistochemistry), healthy control
GE:herath-f480-lung-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in lung sections (immunohistochemistry), PM only
GE:herath-f480-lung-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in lung sections (immunohistochemistry), OVA only
GE:herath-f480-lung-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 58.4% below OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in lung sections (immunohistochemistry), OVA + PM
GE:herath-f480-lung-output-ova-pm · under EXPOSURE:herath-ova-pm
F4/80+ macrophage infiltration increased by 515.3% over the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in lung sections (immunohistochemistry), OVA + PM + fucoidans 100 mg/kg
GE:herath-f480-lung-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Macrophage infiltration attenuated by 74.3% relative to OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in lung sections (immunohistochemistry), OVA + PM + fucoidans 400 mg/kg
GE:herath-f480-lung-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Macrophage infiltration attenuated by 81.2% relative to OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated F4/80+ macrophages in lung sections (immunohistochemistry), OVA + PM + prednisone 5 mg/kg
GE:herath-f480-lung-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; high-dose fucoidan treatment was more or similarly effective to prednisone for attenuating macrophage infiltration. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

The immunohistochemical analysis also revealed an increase of 515.3% (p < 0.0005) in F4/80+ macrophage infiltration in the lungs of PM + OVA mice compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

However, mice treated with a low dose (Figure 6L,P) and a high dose of fucoidans (Figure 6M,P) significantly attenuated PM-exacerbated macrophage infiltration in the lungs (by 74.3% and 81.2% respectively, both p < 0.0005) compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

GE:herath-cd4-trachea

CD4+ T lymphocytes in trachea sections (immunohistochemistry)

CD4+ T cells detected by immunohistochemistry on trachea sections and counted per site in ImageJ v1.46 (Figure 7A-G, 7O). CD4+ T cells increased by 64.1% in OVA + PM over the healthy control (p < 0.005), and fell dose-dependently with fucoidan treatment, by 15.4% at 100 mg/kg and by 56.4% at 400 mg/kg (p < 0.05). No absolute counts are reported.

gene expression method: immunohistochemistry with avidin-biotin peroxidase complex and 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control CD4+ T lymphocytes in trachea sections (immunohistochemistry), healthy control
GE:herath-cd4-trachea-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in trachea sections (immunohistochemistry), PM only
GE:herath-cd4-trachea-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in trachea sections (immunohistochemistry), OVA only
GE:herath-cd4-trachea-output-ova · under EXPOSURE:herath-ova-only
OVA only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in trachea sections (immunohistochemistry), OVA + PM
GE:herath-cd4-trachea-output-ova-pm · under EXPOSURE:herath-ova-pm
CD4+ T cells increased by 64.1% over the healthy control (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in trachea sections (immunohistochemistry), OVA + PM + fucoidans 100 mg/kg
GE:herath-cd4-trachea-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
CD4+ T cell infiltration reduced by 15.4% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in trachea sections (immunohistochemistry), OVA + PM + fucoidans 400 mg/kg
GE:herath-cd4-trachea-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
CD4+ T cell infiltration reduced by 56.4% relative to OVA + PM (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in trachea sections (immunohistochemistry), OVA + PM + prednisone 5 mg/kg
GE:herath-cd4-trachea-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

We observed a marked increase (by 64.1%, p < 0.005) in CD4+ T cells in OVA + PM (Figure 7D,O) compared with the healthy control (Figure 7A,O).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

In contrast, CD4+ T cell infiltration was reduced substantially in a dose-dependent response manner with fucoidan treatments compared with OVA + PM: by 15.4% at a low dose (Figure 7E,O) and by 56.4% (p < 0.05) at a high dose (Figure 7F,O).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

GE:herath-cd4-lung

CD4+ T lymphocytes in lung sections (immunohistochemistry)

CD4+ T cells detected by immunohistochemistry on lung sections and counted per site in ImageJ v1.46 (Figure 7H-N, 7P). CD4+ T cell infiltration rose 197.8% in OVA + PM over the healthy control. The paper also reports that PM exacerbated OVA-induced CD4+ T cell infiltration by 24.5% over OVA alone at p < 0.09 - which does not meet the paper's own 0.05 significance criterion, so that comparison is recorded as not significant. High-dose fucoidan reduced CD4+ T cell infiltration by 59.1% relative to OVA + PM (p < 0.0005), similarly to prednisone. No absolute counts are reported.

gene expression method: immunohistochemistry with avidin-biotin peroxidase complex and 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control CD4+ T lymphocytes in lung sections (immunohistochemistry), healthy control
GE:herath-cd4-lung-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in lung sections (immunohistochemistry), PM only
GE:herath-cd4-lung-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in lung sections (immunohistochemistry), OVA only
GE:herath-cd4-lung-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 24.5% below OVA + PM at p < 0.09, which is not significant by the paper's own criterion. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in lung sections (immunohistochemistry), OVA + PM
GE:herath-cd4-lung-output-ova-pm · under EXPOSURE:herath-ova-pm
CD4+ T cell infiltration increased by 197.8% over the healthy control. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in lung sections (immunohistochemistry), OVA + PM + fucoidans 100 mg/kg
GE:herath-cd4-lung-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the significant reduction only for the high dose. Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in lung sections (immunohistochemistry), OVA + PM + fucoidans 400 mg/kg
GE:herath-cd4-lung-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
CD4+ T cell infiltration reduced by 59.1% relative to OVA + PM (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated CD4+ T lymphocytes in lung sections (immunohistochemistry), OVA + PM + prednisone 5 mg/kg
GE:herath-cd4-lung-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states prednisone had a similar effect to a high dose of fucoidans. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

We observed a 197.8% increase in CD4+ T cell infiltration in OVA + PM (Figure 7K,P) compared with the healthy control (Figure 7H,K).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

However, when treated with a high dose of fucoidan (Figure 7M,P), there was a significant reduction in CD4+ T cell infiltration in the lungs compared with OVA + PM (by 59.1%, p < 0.0005).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the 400 mg/kg fucoidan output record of this assay against OVA + PM.

In the meantime, PM exacerbated OVA-induced CD4+ T cell infiltration compared to treatment with OVA only (by 24.5%, p < 0.09).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase of OVA + PM over OVA only in this assay, at a threshold (p < 0.09) that does not meet the paper's own p < 0.05 significance criterion.

GE:herath-mast-cell-activation-trachea

Activated mast cells in trachea sections (toluidine blue)

Mast cells stained with 0.5% toluidine blue on trachea sections and counted per site in ImageJ v1.46 (Figure 9A-H). Activated mast cells increased by 123.5% in OVA + PM over the healthy control (p < 0.0005) and fell dose-dependently with fucoidan treatment, by 28.9% at 100 mg/kg and by 50.0% at 400 mg/kg (p < 0.005). No absolute counts are reported.

gene expression method: toluidine blue staining with 0.5% methyl green counterstain; mast cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Activated mast cells in trachea sections (toluidine blue), healthy control
GE:herath-mast-cell-activation-trachea-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Activated mast cells in trachea sections (toluidine blue), PM only
GE:herath-mast-cell-activation-trachea-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Activated mast cells in trachea sections (toluidine blue), OVA only
GE:herath-mast-cell-activation-trachea-output-ova · under EXPOSURE:herath-ova-only
OVA only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Activated mast cells in trachea sections (toluidine blue), OVA + PM
GE:herath-mast-cell-activation-trachea-output-ova-pm · under EXPOSURE:herath-ova-pm
Activated mast cells increased by 123.5% over the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Activated mast cells in trachea sections (toluidine blue), OVA + PM + fucoidans 100 mg/kg
GE:herath-mast-cell-activation-trachea-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Mast cell activation reduced by 28.9% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Activated mast cells in trachea sections (toluidine blue), OVA + PM + fucoidans 400 mg/kg
GE:herath-mast-cell-activation-trachea-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Mast cell activation reduced by 50.0% relative to OVA + PM (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Activated mast cells in trachea sections (toluidine blue), OVA + PM + prednisone 5 mg/kg
GE:herath-mast-cell-activation-trachea-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

We observed a marked increase (by 123.5%, p < 0.0005) of activated mast cells in OVA + PM (Figure 9D,H) compared with the healthy control (Figure 9A,H).
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

This further suppressed mast cell activation, degranulation and IgE synthesis of PM exposed mice.
SUPPORT MODEL ORGANISM PMID:32580518

The abstract's statement that fucoidan treatment suppressed mast cell activation, the reduction recorded in the fucoidan output records of this assay.

GE:herath-mast-cell-degranulation-trachea

Degranulated mast cells in trachea sections (toluidine blue)

Degranulated mast cells counted per site on toluidine-blue-stained trachea sections in ImageJ v1.46 (Figure 9I). OVA + PM showed the highest degranulation of all groups, 133.6% above OVA alone. Fucoidan treatments reversed the PM-induced degranulation by 51.9% at 100 mg/kg and by 76.7% at 400 mg/kg (p < 0.005), and the high dose was as effective as prednisone. No absolute counts are reported.

gene expression method: toluidine blue staining with 0.5% methyl green counterstain; degranulated mast cells per site counted in ImageJ v1.46

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Degranulated mast cells in trachea sections (toluidine blue), healthy control
GE:herath-mast-cell-degranulation-trachea-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Degranulated mast cells in trachea sections (toluidine blue), PM only
GE:herath-mast-cell-degranulation-trachea-output-pm · under EXPOSURE:herath-pm-only
PM only arm; OVA + PM showed the highest degranulation compared with the PM and OVA only groups. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Degranulated mast cells in trachea sections (toluidine blue), OVA only
GE:herath-mast-cell-degranulation-trachea-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 133.6% below OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Degranulated mast cells in trachea sections (toluidine blue), OVA + PM
GE:herath-mast-cell-degranulation-trachea-output-ova-pm · under EXPOSURE:herath-ova-pm
The highest mast cell degranulation of all groups. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Degranulated mast cells in trachea sections (toluidine blue), OVA + PM + fucoidans 100 mg/kg
GE:herath-mast-cell-degranulation-trachea-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Degranulation reduced by 51.9% relative to OVA + PM. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Degranulated mast cells in trachea sections (toluidine blue), OVA + PM + fucoidans 400 mg/kg
GE:herath-mast-cell-degranulation-trachea-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Degranulation reduced by 76.7% relative to OVA + PM (p < 0.005); as effective as prednisone. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Degranulated mast cells in trachea sections (toluidine blue), OVA + PM + prednisone 5 mg/kg
GE:herath-mast-cell-degranulation-trachea-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; high dose fucoidan treatment was as effective as prednisone for attenuating PM-exacerbated degranulation of mast cells. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

PM exacerbated OVA-induced mast cell degranulation by 133.6% compared with treatment with OVA only.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the OVA only group.

However, fucoidan treatments upturned the PM-induced degranulation of mast cells in the trachea: by 51.9% at a low dose and by 76.7% (p < 0.005) at a high dose, respectively.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the two fucoidan output records of this assay against OVA + PM.

GE:herath-total-ige-serum

Total IgE in serum (ELISA)

Total serum IgE measured by ELISA (Figure 8A). Total IgE increased by 280.1% in OVA + PM over the healthy control (p < 0.05), and PM augmented the serum IgE level of OVA-sensitised mice by 68.3% over OVA alone (p < 0.05). High-dose fucoidan treatment attenuated the PM-exacerbated level considerably, by 33.2% (p < 0.005), though the paper notes fucoidans were not as effective as prednisone. No absolute IgE concentrations are reported.

gene expression method: ELISA, total IgE kit (Bethyl Lab)

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control Total IgE in serum (ELISA), healthy control
GE:herath-total-ige-serum-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Total IgE in serum (ELISA), PM only
GE:herath-total-ige-serum-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Total IgE in serum (ELISA), OVA only
GE:herath-total-ige-serum-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 68.3% below OVA + PM (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Total IgE in serum (ELISA), OVA + PM
GE:herath-total-ige-serum-output-ova-pm · under EXPOSURE:herath-ova-pm
Total serum IgE increased by 280.1% over the healthy control (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Total IgE in serum (ELISA), OVA + PM + fucoidans 100 mg/kg
GE:herath-total-ige-serum-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the attenuation only for the high dose. Reported as a figure bar only; the paper gives no absolute value for this group.
treated Total IgE in serum (ELISA), OVA + PM + fucoidans 400 mg/kg
GE:herath-total-ige-serum-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Total serum IgE attenuated by 33.2% relative to OVA + PM (p < 0.005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated Total IgE in serum (ELISA), OVA + PM + prednisone 5 mg/kg
GE:herath-total-ige-serum-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states fucoidans were not as effective as prednisone at lowering serum IgE. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

As shown in Figure 8A, the total IgE level was markedly increased (by 280.1%, p < 0.05) in OVA + PM compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the healthy control.

Also, PM augmented the serum IgE level in OVA-sensitized mice (by 68.3%, p < 0.05) compared with treatment with OVA only.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent increase recorded for the OVA + PM output record of this assay against the OVA only group.

Although fucoidans were not as effective as prednisone, high-dose fucoidan treatment also attenuated the PM-exacerbated serum IgE level considerably (by 33.2%, p < 0.005) compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the 400 mg/kg fucoidan output record of this assay against OVA + PM.

GE:herath-ova-specific-ige-serum

OVA-specific IgE in serum (ELISA)

OVA-specific IgE measured by ELISA in serum (Figure 8B). The OVA-specific IgE level was markedly increased in OVA + PM over the healthy control (p < 0.0005) and 18.90% above the OVA only group (p < 0.05). A high dose of fucoidans significantly attenuated the OVA-specific IgE level by 56.3% relative to OVA + PM (p < 0.005) and was more effective than prednisone. No absolute concentrations are reported.

gene expression method: ELISA, OVA-specific IgE kit (BioLegend)

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control OVA-specific IgE in serum (ELISA), healthy control
GE:herath-ova-specific-ige-serum-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgE in serum (ELISA), PM only
GE:herath-ova-specific-ige-serum-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgE in serum (ELISA), OVA only
GE:herath-ova-specific-ige-serum-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, 18.90% below OVA + PM (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgE in serum (ELISA), OVA + PM
GE:herath-ova-specific-ige-serum-output-ova-pm · under EXPOSURE:herath-ova-pm
OVA-specific IgE markedly increased over the healthy control (p < 0.0005). Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgE in serum (ELISA), OVA + PM + fucoidans 100 mg/kg
GE:herath-ova-specific-ige-serum-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the attenuation only for the high dose. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgE in serum (ELISA), OVA + PM + fucoidans 400 mg/kg
GE:herath-ova-specific-ige-serum-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
OVA-specific IgE attenuated by 56.3% relative to OVA + PM (p < 0.005); more effective than prednisone. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgE in serum (ELISA), OVA + PM + prednisone 5 mg/kg
GE:herath-ova-specific-ige-serum-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; high-dose fucoidan was more effective than prednisone on this endpoint. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

As shown in Figure 8B, the OVA-specific IgE level was markedly increased in OVA + PM compared with the healthy control (p < 0.0005) as well as in the OVA only group (by 18.90%, p < 0.05).
SUPPORT MODEL ORGANISM PMID:32580518

States the increase in the OVA + PM output record of this assay against the healthy control and gives its percent increase over the OVA only group.

A high dose of fucoidans significantly attenuated the OVA-specific IgE level (by 56.3%, p < 0.005) compared with OVA + PM and was more effective than prednisone.
SUPPORT MODEL ORGANISM PMID:32580518

Gives the percent reduction recorded for the 400 mg/kg fucoidan output record of this assay against OVA + PM.

GE:herath-ova-specific-igg1-serum

OVA-specific IgG1 in serum (ELISA)

OVA-specific IgG1 measured by ELISA on serum diluted 1:2000 (Figure 8C). OVA + PM moderately increased the OVA-specific IgG1 level compared with OVA only, and high-dose fucoidan treatment attenuated it significantly, by 90.0% relative to OVA + PM (p < 0.05), similarly to prednisone. No absolute concentrations are reported.

gene expression method: ELISA, OVA-specific IgG1 kit (Cayman Chemicals), serum diluted 1:2000

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control OVA-specific IgG1 in serum (ELISA), healthy control
GE:herath-ova-specific-igg1-serum-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG1 in serum (ELISA), PM only
GE:herath-ova-specific-igg1-serum-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG1 in serum (ELISA), OVA only
GE:herath-ova-specific-igg1-serum-output-ova · under EXPOSURE:herath-ova-only
OVA only arm, below the OVA + PM level. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG1 in serum (ELISA), OVA + PM
GE:herath-ova-specific-igg1-serum-output-ova-pm · under EXPOSURE:herath-ova-pm
OVA-specific IgG1 moderately increased compared with OVA only. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG1 in serum (ELISA), OVA + PM + fucoidans 100 mg/kg
GE:herath-ova-specific-igg1-serum-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the attenuation only for the high dose. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG1 in serum (ELISA), OVA + PM + fucoidans 400 mg/kg
GE:herath-ova-specific-igg1-serum-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
OVA-specific IgG1 attenuated by 90.0% relative to OVA + PM (p < 0.05). Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG1 in serum (ELISA), OVA + PM + prednisone 5 mg/kg
GE:herath-ova-specific-igg1-serum-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; high-dose fucoidan behaved similarly to prednisone on this endpoint. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

Moreover, OVA + PM moderately increased the OVA-specific IgG1 level (Figure 8C) compared with OVA only, and similarly to prednisone treatment, high-dose fucoidan treatment attenuated the OVA-specific IgG1 level significantly (by 90.0%, p < 0.05) compared with OVA + PM.
SUPPORT MODEL ORGANISM PMID:32580518

States the moderate increase in the OVA + PM output record of this assay and gives the percent reduction recorded for the 400 mg/kg fucoidan output record against it.

GE:herath-ova-specific-igg2a-serum

OVA-specific IgG2a in serum (ELISA)

OVA-specific IgG2a measured by ELISA in serum (Figure 8D). This is the one immunoglobulin endpoint fucoidans did not change: the paper states plainly that fucoidans did not affect the OVA-specific IgG2a level. It is recorded here so that the negative result travels with the positive ones rather than being dropped. No absolute concentrations and no percent changes are reported for this endpoint, so it has no response_comparisons entry.

gene expression method: ELISA, OVA-specific IgG2a kit (BioLegend)

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control OVA-specific IgG2a in serum (ELISA), healthy control
GE:herath-ova-specific-igg2a-serum-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG2a in serum (ELISA), PM only
GE:herath-ova-specific-igg2a-serum-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG2a in serum (ELISA), OVA only
GE:herath-ova-specific-igg2a-serum-output-ova · under EXPOSURE:herath-ova-only
OVA only arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG2a in serum (ELISA), OVA + PM
GE:herath-ova-specific-igg2a-serum-output-ova-pm · under EXPOSURE:herath-ova-pm
OVA + PM arm. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG2a in serum (ELISA), OVA + PM + fucoidans 100 mg/kg
GE:herath-ova-specific-igg2a-serum-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Unchanged: fucoidans did not affect the OVA-specific IgG2a level. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG2a in serum (ELISA), OVA + PM + fucoidans 400 mg/kg
GE:herath-ova-specific-igg2a-serum-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Unchanged: fucoidans did not affect the OVA-specific IgG2a level. Reported as a figure bar only; the paper gives no absolute value for this group.
treated OVA-specific IgG2a in serum (ELISA), OVA + PM + prednisone 5 mg/kg
GE:herath-ova-specific-igg2a-serum-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm. Reported as a figure bar only; the paper gives no absolute value for this group.

Evidence

However, fucoidans did not affect the OVA-specific IgG2a level (Figure 8D) in serum.
SUPPORT MODEL ORGANISM PMID:32580518

The negative result this assay records: no change in OVA-specific IgG2a with fucoidan treatment.

These results suggest that PM exacerbated OVA sensitization.
SUPPORT MODEL ORGANISM PMID:32580518

The authors' summary of the whole serum immunoglobulin panel, of which this assay is the one endpoint that did not respond to treatment.

GE:herath-cytokines-serum

IL-4, IL-17a and IL-33 in serum (ELISA)

IL-4, IL-17a and IL-33 measured by ELISA in serum (Figure 12A-C). IL-4 was significantly increased in OVA + PM over the healthy control (p < 0.005) and attenuated by high-dose fucoidans (p < 0.05); IL-17a was appreciably increased in OVA + PM and attenuated by high-dose fucoidan without reaching significance; serum IL-33 was the one cytokine fucoidans did not attenuate. The paper reports no absolute concentrations, so these output records carry no magnitude.

gene expression method: ELISA; IL-4 and IL-17a kits (BioLegend), Mouse IL-33 kit (Invitrogen)

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control IL-4, IL-17a and IL-33 in serum (ELISA), healthy control
GE:herath-cytokines-serum-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Figure bars only; the paper gives no numeric cytokine concentrations.
treated IL-4, IL-17a and IL-33 in serum (ELISA), PM only
GE:herath-cytokines-serum-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Figure bars only.
treated IL-4, IL-17a and IL-33 in serum (ELISA), OVA only
GE:herath-cytokines-serum-output-ova · under EXPOSURE:herath-ova-only
OVA only arm; PM exacerbated IL-4 secretion compared with OVA alone. Figure bars only.
treated IL-4, IL-17a and IL-33 in serum (ELISA), OVA + PM
GE:herath-cytokines-serum-output-ova-pm · under EXPOSURE:herath-ova-pm
Serum IL-4 significantly increased over the healthy control (p < 0.005); IL-17a appreciably increased. Figure bars only.
treated IL-4, IL-17a and IL-33 in serum (ELISA), OVA + PM + fucoidans 100 mg/kg
GE:herath-cytokines-serum-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the cytokine attenuation only for the high dose. Figure bars only.
treated IL-4, IL-17a and IL-33 in serum (ELISA), OVA + PM + fucoidans 400 mg/kg
GE:herath-cytokines-serum-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Serum IL-4 attenuated relative to OVA + PM (p < 0.05); IL-17a attenuated but not significantly; serum IL-33 not attenuated. Figure bars only.
treated IL-4, IL-17a and IL-33 in serum (ELISA), OVA + PM + prednisone 5 mg/kg
GE:herath-cytokines-serum-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; the paper states a high dose of fucoidan was as effective as prednisone at attenuating the PM-exacerbated IL-4 level. Figure bars only.

Evidence

The IL-4 level was significantly increased in OVA + PM compared with the healthy control in the serum (Figure 12A, p < 0.005), BALF (Figure 12D, p < 0.05), and lungs (Figure 12G, p < 0.05).
SUPPORT MODEL ORGANISM PMID:32580518

States the serum IL-4 increase recorded in the OVA + PM output record of this assay (p < 0.005).

PM exacerbated the IL-4 secretion compared with OVA alone, and treatment with high-dose fucoidans attenuated the IL-4 level compared with OVA + PM in the serum, BALF, and lungs (all p < 0.05).
SUPPORT MODEL ORGANISM PMID:32580518

States the IL-4 reduction recorded in the 400 mg/kg fucoidan output record of this assay, and the exacerbation of OVA-induced IL-4 by PM.

Moreover, fucoidans did not attenuate secretion of the epithelial-cell-derived cytokine IL-33 in the serum (Figure 10C).
SUPPORT MODEL ORGANISM PMID:32580518

The negative result recorded in the fucoidan output records of this assay for serum IL-33, in contrast to IL-33 in BALF and lung.

GE:herath-cytokines-lung

IL-4, IL-17a and IL-33 in lung homogenate (ELISA)

IL-4, IL-17a and IL-33 measured by ELISA in lung homogenate supernatant (Figure 12G-I). IL-4 was significantly increased in OVA + PM over the healthy control (p < 0.05) and attenuated by high-dose fucoidans (p < 0.05); IL-17a was appreciably increased and attenuated without reaching significance; IL-33 was significantly increased in the lungs of OVA + PM mice and attenuated by high-dose fucoidan, which the authors read as contributing to the attenuated Th2 response. No absolute concentrations are reported.

gene expression method: ELISA; IL-4 and IL-17a kits (BioLegend), Mouse IL-33 kit (Invitrogen)

Exposure conditions

ConditionAgentConcentrationDuration
Healthy control: saline by oral gavage only, no OVA sensitisation and no PM exposure
EXPOSURE:herath-healthy-control
— — —
PM only: nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days, no OVA sensitisation
EXPOSURE:herath-pm-only
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA only: 10 ug ovalbumin in 200 uL saline with 2 mg Al(OH)3 intraperitoneally, no PM exposure
EXPOSURE:herath-ova-only
— — —
OVA sensitisation plus nebulised PM 5 mg/m3 for 30 min/day on 7 consecutive days
EXPOSURE:herath-ova-pm
fine respirable suspended particulate matter
ENVO:01000415
5 milligram per cubic meter 7 day
OVA sensitisation and PM exposure plus fucoidans 100 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-100
fucoidan
CHEBI:5181
100 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus fucoidans 400 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-fucoidan-400
fucoidan
CHEBI:5181
400 milligram per kilogram 7 day
OVA sensitisation and PM exposure plus prednisone 5 mg/kg by oral gavage on the 7 exposure days
EXPOSURE:herath-ova-pm-prednisone
prednisone
CHEBI:8382
5 milligram per kilogram 7 day

Outputs

GroupOutputDescription
control IL-4, IL-17a and IL-33 in lung homogenate (ELISA), healthy control
GE:herath-cytokines-lung-output-control · under EXPOSURE:herath-healthy-control
Healthy control reference group. Figure bars only; the paper gives no numeric cytokine concentrations.
treated IL-4, IL-17a and IL-33 in lung homogenate (ELISA), PM only
GE:herath-cytokines-lung-output-pm · under EXPOSURE:herath-pm-only
PM only arm. Figure bars only.
treated IL-4, IL-17a and IL-33 in lung homogenate (ELISA), OVA only
GE:herath-cytokines-lung-output-ova · under EXPOSURE:herath-ova-only
OVA only arm; PM exacerbated IL-4 secretion compared with OVA alone. Figure bars only.
treated IL-4, IL-17a and IL-33 in lung homogenate (ELISA), OVA + PM
GE:herath-cytokines-lung-output-ova-pm · under EXPOSURE:herath-ova-pm
Lung IL-4 significantly increased over the healthy control (p < 0.05); IL-17a appreciably increased; IL-33 significantly increased. Figure bars only.
treated IL-4, IL-17a and IL-33 in lung homogenate (ELISA), OVA + PM + fucoidans 100 mg/kg
GE:herath-cytokines-lung-output-fucoidan-100 · under EXPOSURE:herath-ova-pm-fucoidan-100
Low-dose fucoidan arm; the paper states the cytokine attenuation only for the high dose. Figure bars only.
treated IL-4, IL-17a and IL-33 in lung homogenate (ELISA), OVA + PM + fucoidans 400 mg/kg
GE:herath-cytokines-lung-output-fucoidan-400 · under EXPOSURE:herath-ova-pm-fucoidan-400
Lung IL-4 attenuated relative to OVA + PM (p < 0.05); IL-17a attenuated but not significantly; IL-33 attenuated. Figure bars only.
treated IL-4, IL-17a and IL-33 in lung homogenate (ELISA), OVA + PM + prednisone 5 mg/kg
GE:herath-cytokines-lung-output-prednisone · under EXPOSURE:herath-ova-pm-prednisone
Prednisone arm; a high dose of fucoidan attenuated lung IL-33 as effectively as prednisone. Figure bars only.

Evidence

The level of IL-17a was also appreciably increased in the serum (Figure 12B), BALF (Figure 12E), and lungs (Figure 12H) of the OVA + PM group compared with the healthy control.
SUPPORT MODEL ORGANISM PMID:32580518

States the lung IL-17a increase recorded in the OVA + PM output record of this assay.

Although not significant, however, high-dose fucoidan treatment attenuated the level of IL-17a.
SUPPORT MODEL ORGANISM PMID:32580518

States that the IL-17a reduction recorded in the 400 mg/kg fucoidan output record of this assay did not reach significance.

In our results, we demonstrated that a high dose of fucoidan attenuates the IL-33 level in BALF and the lungs as effectively as prednisone.
SUPPORT MODEL ORGANISM PMID:32580518

States the lung IL-33 reduction recorded in the 400 mg/kg fucoidan output record of this assay, and its equivalence to the prednisone arm.

Response comparisons

COMP:herath-mda-ihc-ova-pm-vs-control

MDA positive cell percentage in lung, OVA + PM vs healthy control

PM exposure as well as OVA significantly enhanced the MDA positive cell percentage in the lungs relative to the healthy control. Reported significance threshold: p < 0.0005. The paper states no magnitude for this change, so change_type and change_value are omitted.

measurement: lipid_peroxidation direction: increased derivation: reported in paper from assay: OX:herath-mda-ihc-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-ihc-fuc400-vs-ova-pm

MDA positive cell percentage in lung, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

Fucoidans dose-dependently attenuated the MDA positive cell percentage in the lungs compared with OVA + PM. The paper reports no significance threshold for this comparison. The paper states no magnitude for this change, so change_type and change_value are omitted.

measurement: lipid_peroxidation direction: decreased derivation: reported in paper from assay: OX:herath-mda-ihc-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-lung-pm-vs-control

Lung MDA, PM only vs healthy control

Lung MDA increased by 88.4% in the PM only group relative to the healthy control. Reported significance threshold: p < 0.05.

measurement: malondialdehyde_level direction: increased type: percent change value: 88.4 percent derivation: reported in paper from assay: OX:herath-mda-lung-homogenate

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-lung-ova-vs-control

Lung MDA, OVA only vs healthy control

Lung MDA increased by 88.6% in the OVA only group relative to the healthy control. Reported significance threshold: p < 0.05.

measurement: malondialdehyde_level direction: increased type: percent change value: 88.6 percent derivation: reported in paper from assay: OX:herath-mda-lung-homogenate

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-lung-ova-pm-vs-control

Lung MDA, OVA + PM vs healthy control

Lung MDA increased by 89.5% in the OVA + PM group relative to the healthy control. Reported significance threshold: p < 0.05.

measurement: malondialdehyde_level direction: increased type: percent change value: 89.5 percent derivation: reported in paper from assay: OX:herath-mda-lung-homogenate

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-lung-fuc100-vs-ova-pm

Lung MDA, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Lung MDA fell by 51.2% with low-dose (100 mg/kg) fucoidan treatment relative to OVA + PM. The paper reports no significance threshold for this comparison. The paper reports the threshold p < 0.05 for the high-dose reduction only.

measurement: malondialdehyde_level direction: decreased type: percent change value: 51.2 percent derivation: reported in paper from assay: OX:herath-mda-lung-homogenate

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-lung-fuc400-vs-ova-pm

Lung MDA, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

Lung MDA fell by 70.4% with high-dose (400 mg/kg) fucoidan treatment relative to OVA + PM. Reported significance threshold: p < 0.05.

measurement: malondialdehyde_level direction: decreased type: percent change value: 70.4 percent derivation: reported in paper from assay: OX:herath-mda-lung-homogenate

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-serum-pm-vs-control

Serum MDA, PM only vs healthy control

Serum MDA increased by 74.6% in the PM only group relative to the healthy control. Reported significance threshold: p < 0.005.

measurement: malondialdehyde_level direction: increased type: percent change value: 74.6 percent derivation: reported in paper from assay: OX:herath-mda-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-serum-ova-pm-vs-control

Serum MDA, OVA + PM vs healthy control

Serum MDA increased by 74.6% in the OVA + PM group relative to the healthy control - the same percentage the paper reports for PM only. Reported significance threshold: p < 0.005.

measurement: malondialdehyde_level direction: increased type: percent change value: 74.6 percent derivation: reported in paper from assay: OX:herath-mda-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-serum-fuc100-vs-ova-pm

Serum MDA, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Serum MDA fell by 44.8% with low-dose (100 mg/kg) fucoidan treatment relative to OVA + PM. Reported significance threshold: p < 0.0005.

measurement: malondialdehyde_level direction: decreased type: percent change value: 44.8 percent derivation: reported in paper from assay: OX:herath-mda-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mda-serum-fuc400-vs-ova-pm

Serum MDA, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

Serum MDA fell by 78.0% with high-dose (400 mg/kg) fucoidan treatment relative to OVA + PM. Reported significance threshold: p < 0.0005.

measurement: malondialdehyde_level direction: decreased type: percent change value: 78.0 percent derivation: reported in paper from assay: OX:herath-mda-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-8ohdg-ova-vs-control

Serum 8-OHdG, OVA only vs healthy control

Serum 8-OHdG increased by 81.4% in the OVA only group relative to the healthy control. Reported significance threshold: p < 0.005.

measurement: eight_ohdg_level direction: increased type: percent change value: 81.4 percent derivation: reported in paper from assay: OX:herath-8ohdg-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-8ohdg-pm-vs-control

Serum 8-OHdG, PM only vs healthy control

Serum 8-OHdG increased by 122.2% in the PM only group relative to the healthy control. Reported significance threshold: p < 0.005.

measurement: eight_ohdg_level direction: increased type: percent change value: 122.2 percent derivation: reported in paper from assay: OX:herath-8ohdg-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-8ohdg-ova-pm-vs-control

Serum 8-OHdG, OVA + PM vs healthy control

Serum 8-OHdG increased by 116.8% in the OVA + PM group relative to the healthy control. Reported significance threshold: p < 0.005.

measurement: eight_ohdg_level direction: increased type: percent change value: 116.8 percent derivation: reported in paper from assay: OX:herath-8ohdg-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-8ohdg-fuc100-vs-ova-pm

Serum 8-OHdG, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Serum 8-OHdG fell by 11.8% with low-dose fucoidan treatment relative to OVA + PM. The paper states explicitly that this reduction was not significant.

measurement: eight_ohdg_level direction: decreased type: percent change value: 11.8 percent derivation: reported in paper from assay: OX:herath-8ohdg-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-8ohdg-fuc400-vs-ova-pm

Serum 8-OHdG, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

Serum 8-OHdG fell by 11.8% with high-dose fucoidan treatment relative to OVA + PM - the paper reports the same percentage for both fucoidan doses and states explicitly that the reduction was not significant.

measurement: eight_ohdg_level direction: decreased type: percent change value: 11.8 percent derivation: reported in paper from assay: OX:herath-8ohdg-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-8ohdg-pred-vs-ova-pm

Serum 8-OHdG, OVA + PM + prednisone vs OVA + PM

Serum 8-OHdG fell by 25.7% with prednisone relative to OVA + PM. Reported significance threshold: p < 0.05. The authors contrast this with the non-significant fucoidan effect on the same marker and infer that fucoidans and prednisone attenuate PM-induced oxidative stress through different signalling pathways.

measurement: eight_ohdg_level direction: decreased type: percent change value: 25.7 percent derivation: reported in paper from assay: OX:herath-8ohdg-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-penh-ova-pm-vs-ova

Airway hyper-responsiveness (Penh), OVA + PM vs OVA only

PM exacerbated OVA-induced airway hyper-responsiveness by 20.7%. Reported significance threshold: p < 0.05. Measured at the high methacholine concentration (50 mg/mL).

measurement: lung_resistance direction: increased type: percent change value: 20.7 percent derivation: reported in paper from assay: LF:herath-penh-methacholine

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-penh-fuc400-vs-ova-pm

Airway hyper-responsiveness (Penh), OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidans markedly attenuated the PM-exacerbated airway hyper-responsiveness by 43.0% at 50 mg/mL methacholine. Reported significance threshold: p < 0.0005.

measurement: lung_resistance direction: decreased type: percent change value: 43.0 percent derivation: reported in paper from assay: LF:herath-penh-methacholine

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-balf-eosinophil-fuc400-vs-ova-pm

BALF eosinophil infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidans significantly attenuated the PM-exacerbated infiltration of eosinophils in BALF. Reported significance threshold: p < 0.05. The paper reports the BALF differential as figure bars with no counts or percentages, so change_type and change_value are omitted.

measurement: eosinophil_percentage direction: decreased derivation: reported in paper from assay: BALF:herath-inflammatory-cell-differential

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-balf-neutrophil-fuc400-vs-ova-pm

BALF neutrophil infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidans significantly attenuated the PM-exacerbated infiltration of neutrophils in BALF. Reported significance threshold: p < 0.05. The paper reports the BALF differential as figure bars with no counts or percentages, so change_type and change_value are omitted.

measurement: neutrophil_percentage direction: decreased derivation: reported in paper from assay: BALF:herath-inflammatory-cell-differential

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-balf-lymphocyte-fuc400-vs-ova-pm

BALF lymphocyte infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidans significantly attenuated the PM-exacerbated infiltration of lymphocytes in BALF. Reported significance threshold: p < 0.05. The paper reports the BALF differential as figure bars with no counts or percentages, so change_type and change_value are omitted.

measurement: lymphocyte_percentage direction: decreased derivation: reported in paper from assay: BALF:herath-inflammatory-cell-differential

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-balf-macrophage-fuc400-vs-ova-pm

BALF macrophage count, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

Fucoidans dose-dependently attenuated the PM-exacerbated macrophage count in BALF, but the paper states explicitly that this reduction was not significant. No magnitude is reported.

measurement: macrophage_percentage direction: decreased derivation: reported in paper from assay: BALF:herath-inflammatory-cell-differential

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-trachea-ova-pm-vs-control

Trachea eosinophil infiltration, OVA + PM vs healthy control

PM increased eosinophil infiltration in the trachea of OVA-sensitised mice by 500.0% relative to the healthy control. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: increased type: percent change value: 500.0 percent derivation: reported in paper from assay: GE:herath-eosinophils-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-trachea-ova-pm-vs-ova

Trachea eosinophil infiltration, OVA + PM vs OVA only

OVA + PM exacerbated eosinophil infiltration in the trachea by 56.4% relative to the OVA only group. Reported significance threshold: p < 0.005.

measurement: percentage_positive_cells direction: increased type: percent change value: 56.4 percent derivation: reported in paper from assay: GE:herath-eosinophils-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-trachea-fuc100-vs-ova-pm

Trachea eosinophil infiltration, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment suppressed PM-exacerbated eosinophil infiltration in the trachea by 52.0% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 52.0 percent derivation: reported in paper from assay: GE:herath-eosinophils-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-trachea-fuc400-vs-ova-pm

Trachea eosinophil infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment suppressed PM-exacerbated eosinophil infiltration in the trachea by 72.0% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 72.0 percent derivation: reported in paper from assay: GE:herath-eosinophils-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-lung-ova-pm-vs-control

Lung eosinophil infiltration, OVA + PM vs healthy control

Eosinophil infiltration in the lungs was 566.6% above the healthy control in the OVA + PM group. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: increased type: percent change value: 566.6 percent derivation: reported in paper from assay: GE:herath-eosinophils-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-lung-ova-pm-vs-ova

Lung eosinophil infiltration, OVA + PM vs OVA only

Eosinophil infiltration in the lungs was 74.0% above the OVA only group in the OVA + PM group. Reported significance threshold: p < 0.005.

measurement: percentage_positive_cells direction: increased type: percent change value: 74.0 percent derivation: reported in paper from assay: GE:herath-eosinophils-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-lung-fuc100-vs-ova-pm

Lung eosinophil infiltration, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment suppressed eosinophil infiltration in the lungs by 45.0% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 45.0 percent derivation: reported in paper from assay: GE:herath-eosinophils-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-eos-lung-fuc400-vs-ova-pm

Lung eosinophil infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment suppressed eosinophil infiltration in the lungs by 65.0% relative to OVA + PM, as effectively as prednisone. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 65.0 percent derivation: reported in paper from assay: GE:herath-eosinophils-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-trachea-ova-pm-vs-control

Trachea Gr-1+ granulocyte influx, OVA + PM vs healthy control

The OVA + PM group enhanced the influx of granulocytes in the trachea by 200.0% relative to the healthy control. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: increased type: percent change value: 200.0 percent derivation: reported in paper from assay: GE:herath-gr1-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-trachea-ova-pm-vs-ova

Trachea Gr-1+ granulocyte influx, OVA + PM vs OVA only

PM exacerbated Gr-1+ cell infiltration by 52.5% in the trachea of OVA-sensitised mice relative to OVA alone. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: increased type: percent change value: 52.5 percent derivation: reported in paper from assay: GE:herath-gr1-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-trachea-fuc100-vs-ova-pm

Trachea Gr-1+ granulocyte influx, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment reduced the PM-exacerbated influx of Gr-1+ cells in the trachea by 36.6% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 36.6 percent derivation: reported in paper from assay: GE:herath-gr1-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-trachea-fuc400-vs-ova-pm

Trachea Gr-1+ granulocyte influx, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment reduced the PM-exacerbated influx of Gr-1+ cells in the trachea by 53.3% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 53.3 percent derivation: reported in paper from assay: GE:herath-gr1-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-trachea-pred-vs-ova-pm

Trachea Gr-1+ granulocyte influx, OVA + PM + prednisone vs OVA + PM

Prednisone attenuated the granulocyte influx in the trachea by 55.5% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 55.5 percent derivation: reported in paper from assay: GE:herath-gr1-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-lung-ova-pm-vs-control

Lung Gr-1+ granulocyte infiltration, OVA + PM vs healthy control

Granulocyte infiltration in the lungs increased by 247.8% in OVA + PM relative to the healthy control. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: increased type: percent change value: 247.8 percent derivation: reported in paper from assay: GE:herath-gr1-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-lung-ova-pm-vs-ova

Lung Gr-1+ granulocyte infiltration, OVA + PM vs OVA only

PM exacerbated OVA-induced granulocyte infiltration in the lungs by 113.3% relative to OVA alone. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: increased type: percent change value: 113.3 percent derivation: reported in paper from assay: GE:herath-gr1-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-gr1-lung-fuc400-vs-ova-pm

Lung Gr-1+ granulocyte infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment significantly reduced granulocyte infiltration in the lung by 66.4% relative to OVA + PM, and the paper states fucoidans were more effective than prednisone on this endpoint. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: decreased type: percent change value: 66.4 percent derivation: reported in paper from assay: GE:herath-gr1-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-f480-trachea-ova-pm-vs-control

Trachea F4/80+ macrophage infiltration, OVA + PM vs healthy control

The OVA + PM group showed clearly enhanced macrophage infiltration in the trachea, +250.0% relative to the healthy control. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: increased type: percent change value: 250.0 percent derivation: reported in paper from assay: GE:herath-f480-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-f480-trachea-fuc100-vs-ova-pm

Trachea F4/80+ macrophage infiltration, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment significantly reduced macrophage infiltration in the trachea by 34.7% relative to OVA + PM. Reported significance threshold: p < 0.05.

measurement: percentage_positive_cells direction: decreased type: percent change value: 34.7 percent derivation: reported in paper from assay: GE:herath-f480-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-f480-trachea-fuc400-vs-ova-pm

Trachea F4/80+ macrophage infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment significantly reduced macrophage infiltration in the trachea by 45.7% relative to OVA + PM. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: decreased type: percent change value: 45.7 percent derivation: reported in paper from assay: GE:herath-f480-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-f480-lung-ova-pm-vs-control

Lung F4/80+ macrophage infiltration, OVA + PM vs healthy control

F4/80+ macrophage infiltration in the lungs of PM + OVA mice increased by 515.3% relative to the healthy control. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: increased type: percent change value: 515.3 percent derivation: reported in paper from assay: GE:herath-f480-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-f480-lung-ova-pm-vs-ova

Lung F4/80+ macrophage infiltration, OVA + PM vs OVA only

PM exacerbated macrophage infiltration in the lungs of OVA-sensitised mice by 58.4% relative to OVA alone. Reported significance threshold: p < 0.005.

measurement: percentage_positive_cells direction: increased type: percent change value: 58.4 percent derivation: reported in paper from assay: GE:herath-f480-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-f480-lung-fuc100-vs-ova-pm

Lung F4/80+ macrophage infiltration, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment significantly attenuated PM-exacerbated macrophage infiltration in the lungs by 74.3% relative to OVA + PM. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: decreased type: percent change value: 74.3 percent derivation: reported in paper from assay: GE:herath-f480-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-f480-lung-fuc400-vs-ova-pm

Lung F4/80+ macrophage infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment significantly attenuated PM-exacerbated macrophage infiltration in the lungs by 81.2% relative to OVA + PM. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: decreased type: percent change value: 81.2 percent derivation: reported in paper from assay: GE:herath-f480-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-cd4-trachea-ova-pm-vs-control

Trachea CD4+ T cell infiltration, OVA + PM vs healthy control

CD4+ T cells in the trachea increased by 64.1% in OVA + PM relative to the healthy control. Reported significance threshold: p < 0.005.

measurement: percentage_positive_cells direction: increased type: percent change value: 64.1 percent derivation: reported in paper from assay: GE:herath-cd4-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-cd4-trachea-fuc100-vs-ova-pm

Trachea CD4+ T cell infiltration, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment reduced CD4+ T cell infiltration in the trachea by 15.4% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 15.4 percent derivation: reported in paper from assay: GE:herath-cd4-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-cd4-trachea-fuc400-vs-ova-pm

Trachea CD4+ T cell infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment reduced CD4+ T cell infiltration in the trachea by 56.4% relative to OVA + PM. Reported significance threshold: p < 0.05.

measurement: percentage_positive_cells direction: decreased type: percent change value: 56.4 percent derivation: reported in paper from assay: GE:herath-cd4-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-cd4-lung-ova-pm-vs-control

Lung CD4+ T cell infiltration, OVA + PM vs healthy control

CD4+ T cell infiltration in the lungs increased by 197.8% in OVA + PM relative to the healthy control. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: increased type: percent change value: 197.8 percent derivation: reported in paper from assay: GE:herath-cd4-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-cd4-lung-ova-pm-vs-ova

Lung CD4+ T cell infiltration, OVA + PM vs OVA only

PM exacerbated OVA-induced CD4+ T cell infiltration in the lungs by 24.5% relative to OVA alone, but the paper reports this at p < 0.09 - above the p < 0.05 criterion it sets in its own statistics section, so this change is NOT statistically significant.

measurement: percentage_positive_cells direction: increased type: percent change value: 24.5 percent derivation: reported in paper from assay: GE:herath-cd4-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-cd4-lung-fuc400-vs-ova-pm

Lung CD4+ T cell infiltration, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment significantly reduced CD4+ T cell infiltration in the lungs by 59.1% relative to OVA + PM. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: decreased type: percent change value: 59.1 percent derivation: reported in paper from assay: GE:herath-cd4-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mast-activation-ova-pm-vs-control

Activated mast cells in trachea, OVA + PM vs healthy control

Activated mast cells in the trachea increased by 123.5% in OVA + PM relative to the healthy control. Reported significance threshold: p < 0.0005.

measurement: percentage_positive_cells direction: increased type: percent change value: 123.5 percent derivation: reported in paper from assay: GE:herath-mast-cell-activation-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mast-activation-fuc100-vs-ova-pm

Activated mast cells in trachea, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment reduced mast cell activation by 28.9% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 28.9 percent derivation: reported in paper from assay: GE:herath-mast-cell-activation-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mast-activation-fuc400-vs-ova-pm

Activated mast cells in trachea, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment reduced mast cell activation by 50.0% relative to OVA + PM. Reported significance threshold: p < 0.005.

measurement: percentage_positive_cells direction: decreased type: percent change value: 50.0 percent derivation: reported in paper from assay: GE:herath-mast-cell-activation-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mast-degran-ova-pm-vs-ova

Degranulated mast cells in trachea, OVA + PM vs OVA only

PM exacerbated OVA-induced mast cell degranulation by 133.6% relative to OVA alone. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: increased type: percent change value: 133.6 percent derivation: reported in paper from assay: GE:herath-mast-cell-degranulation-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mast-degran-fuc100-vs-ova-pm

Degranulated mast cells in trachea, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment reversed the PM-induced degranulation of mast cells in the trachea by 51.9% relative to OVA + PM. The paper reports no significance threshold for this comparison.

measurement: percentage_positive_cells direction: decreased type: percent change value: 51.9 percent derivation: reported in paper from assay: GE:herath-mast-cell-degranulation-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-mast-degran-fuc400-vs-ova-pm

Degranulated mast cells in trachea, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment reversed the PM-induced degranulation of mast cells in the trachea by 76.7% relative to OVA + PM, as effectively as prednisone. Reported significance threshold: p < 0.005.

measurement: percentage_positive_cells direction: decreased type: percent change value: 76.7 percent derivation: reported in paper from assay: GE:herath-mast-cell-degranulation-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-total-ige-ova-pm-vs-control

Total serum IgE, OVA + PM vs healthy control

Total serum IgE increased by 280.1% in OVA + PM relative to the healthy control. Reported significance threshold: p < 0.05.

measurement: protein_level direction: increased type: percent change value: 280.1 percent derivation: reported in paper from assay: GE:herath-total-ige-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-total-ige-ova-pm-vs-ova

Total serum IgE, OVA + PM vs OVA only

PM augmented the serum IgE level of OVA-sensitised mice by 68.3% relative to OVA alone. Reported significance threshold: p < 0.05.

measurement: protein_level direction: increased type: percent change value: 68.3 percent derivation: reported in paper from assay: GE:herath-total-ige-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-total-ige-fuc400-vs-ova-pm

Total serum IgE, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment attenuated the PM-exacerbated serum IgE level by 33.2% relative to OVA + PM, though the paper states fucoidans were not as effective as prednisone. Reported significance threshold: p < 0.005.

measurement: protein_level direction: decreased type: percent change value: 33.2 percent derivation: reported in paper from assay: GE:herath-total-ige-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-ova-ige-ova-pm-vs-ova

OVA-specific serum IgE, OVA + PM vs OVA only

The OVA-specific IgE level was 18.90% higher in OVA + PM than in the OVA only group. Reported significance threshold: p < 0.05.

measurement: protein_level direction: increased type: percent change value: 18.90 percent derivation: reported in paper from assay: GE:herath-ova-specific-ige-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-ova-ige-fuc400-vs-ova-pm

OVA-specific serum IgE, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment significantly attenuated the OVA-specific IgE level by 56.3% relative to OVA + PM and was more effective than prednisone. Reported significance threshold: p < 0.005.

measurement: protein_level direction: decreased type: percent change value: 56.3 percent derivation: reported in paper from assay: GE:herath-ova-specific-ige-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-ova-igg1-fuc400-vs-ova-pm

OVA-specific serum IgG1, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment attenuated the OVA-specific IgG1 level significantly, by 90.0% relative to OVA + PM, similarly to prednisone. Reported significance threshold: p < 0.05.

measurement: protein_level direction: decreased type: percent change value: 90.0 percent derivation: reported in paper from assay: GE:herath-ova-specific-igg1-serum

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-pas-trachea-ova-pm-vs-control

Trachea PAS positive cell proportion, OVA + PM vs healthy control

PAS staining of the trachea showed a 287.5% increase in goblet cell hyperplasia and mucus secretion in OVA + PM relative to the healthy control. Reported significance threshold: p < 0.0005.

measurement: goblet_cell_percentage direction: increased type: percent change value: 287.5 percent derivation: reported in paper from assay: GCM:herath-pas-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-pas-trachea-fuc100-vs-ova-pm

Trachea PAS positive cell proportion, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment attenuated the PAS positive cell proportion in the trachea by 9.1% relative to OVA + PM. The paper reports no significance threshold for this comparison. The paper reports the threshold p < 0.005 for the high-dose reduction only.

measurement: goblet_cell_percentage direction: decreased type: percent change value: 9.1 percent derivation: reported in paper from assay: GCM:herath-pas-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-pas-trachea-fuc400-vs-ova-pm

Trachea PAS positive cell proportion, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment attenuated the PAS positive cell proportion in the trachea by 36.7% relative to OVA + PM. Reported significance threshold: p < 0.005.

measurement: goblet_cell_percentage direction: decreased type: percent change value: 36.7 percent derivation: reported in paper from assay: GCM:herath-pas-trachea

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-pas-lung-ova-pm-vs-control

Lung PAS positive cell proportion, OVA + PM vs healthy control

Mucus secretion and goblet cell hyperplasia in the lungs increased by 378.0% in OVA + PM relative to the healthy control. Reported significance threshold: p < 0.0005.

measurement: goblet_cell_percentage direction: increased type: percent change value: 378.0 percent derivation: reported in paper from assay: GCM:herath-pas-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-pas-lung-ova-pm-vs-ova

Lung PAS positive cell proportion, OVA + PM vs OVA only

PM clearly induced PAS positive cells in the lungs, by 49.0% relative to OVA alone. Reported significance threshold: p < 0.005.

measurement: goblet_cell_percentage direction: increased type: percent change value: 49.0 percent derivation: reported in paper from assay: GCM:herath-pas-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-pas-lung-fuc100-vs-ova-pm

Lung PAS positive cell proportion, OVA + PM + fucoidans 100 mg/kg vs OVA + PM

Low-dose fucoidan treatment reduced the number of PAS positive cells in the lungs by 35.2% relative to OVA + PM. Reported significance threshold: p < 0.005.

measurement: goblet_cell_percentage direction: decreased type: percent change value: 35.2 percent derivation: reported in paper from assay: GCM:herath-pas-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

COMP:herath-pas-lung-fuc400-vs-ova-pm

Lung PAS positive cell proportion, OVA + PM + fucoidans 400 mg/kg vs OVA + PM

High-dose fucoidan treatment reduced the number of PAS positive cells in the lungs by 66.8% relative to OVA + PM. Reported significance threshold: p < 0.0005.

measurement: goblet_cell_percentage direction: decreased type: percent change value: 66.8 percent derivation: reported in paper from assay: GCM:herath-pas-lung

Statistical test: one-way analysis of variance followed by Tukey's multiple comparison test

Key-event relationships

KER:herath-oxidative-stress-to-airway-inflammation

Increased oxidative stress leads to airway inflammation

The paper's framing of its own exposure arm: PM inhalation triggers oxidative stress, which drives the inflammation that then sustains airway injury. The oxidative markers (lung and serum MDA, serum 8-OHdG) and the inflammatory endpoints (BALF differential, eosinophil, granulocyte, macrophage and CD4+ T cell infiltration) rose together in the same animals, and oral fucoidans lowered both. The causal step itself is argued from the literature rather than tested here - there is no antioxidant-only arm that would separate the oxidative stress from the inflammation - so the support is recorded as moderate.

Exposure to PM initially triggers oxidative stress, and the oxidative stress further leads to lipid peroxidation.
SUPPORT MODEL ORGANISM PMID:32580518

States the upstream event of this relationship and the lipid-peroxidation readout through which the paper measures it.

Since prolonged inflammation is a vital mechanism in the development of pulmonary diseases, PM inhalation and subsequent ROS generation pose a serious risk at all stages of airway injury.
SUPPORT MODEL ORGANISM PMID:32580518

The authors' statement linking PM-induced ROS generation to inflammation and airway injury, the downstream side of this relationship.

KER:herath-airway-inflammation-to-systemic-inflammation

Airway inflammation is accompanied by increased systemic inflammation

The same exposure that raised airway inflammatory endpoints also raised serum total IgE, OVA-specific IgE and IgG1, serum IL-4 and serum IL-17a, and high-dose fucoidans lowered both sets together. The paper measures the airway and systemic compartments in parallel without testing which drives which, so this is recorded as an association with weak support rather than a causal step.

Consistently, high-dose fucoidan (400 mg/kg) treatment was as effective as prednisone for reducing the serum IgE level, a hallmark of the pathogenesis of Th2-mediated allergic airway inflammation.
SUPPORT MODEL ORGANISM PMID:32580518

Ties the systemic readout of this relationship - serum IgE - to the airway inflammation the paper is characterising, as the authors themselves frame it.

These results suggest that fucoidans might exert their therapeutic efficacy against PM-exacerbated allergic airway inflammation via attenuating the Th2 immune response.
SUPPORT MODEL ORGANISM PMID:32580518

The authors' reading of the systemic Th2 cytokine and immunoglobulin results alongside the airway results, which is the association this relationship records.

KER:herath-airway-inflammation-to-goblet-hyperplasia

Airway inflammation leads to goblet cell hyperplasia

Airway inflammation (increased) → indirectly leads to → Goblet cell hyperplasia (increased) moderate support

The paper states its own causal reading explicitly: the goblet cell hyperplasia and increased mucus secretion seen in PM-exposed mice are taken to be a consequence of the PM-exacerbated Th2/Th17 response and macrophage infiltration. Both sides were measured in the same animals - the inflammatory cell infiltration by BALF differential and immunohistochemistry, the hyperplasia by PAS staining of trachea and lung - and both fell together under fucoidan treatment.

Despite having significant pulmonary allergic inflammation, we observed goblet cell hyperplasia and increased mucus secretion in PM-exposed mice, and we believe this is a consequence of the PM-exacerbated activation of the Th2/Th17 response and macrophage infiltration [41].
SUPPORT MODEL ORGANISM PMID:32580518

The authors' own statement of this relationship: they read the goblet cell hyperplasia as a consequence of the inflammatory response, which is the upstream event here.

One hallmark of asthma is the hyperproduction of mucus in response to inflammatory provocation, and we performed PAS staining to examine goblet cell hyperplasia and mucus secretion (Figure 10).
SUPPORT MODEL ORGANISM PMID:32580518

Names the measurement behind the downstream event of this relationship and the inflammatory provocation that the paper places upstream of it.

KER:herath-goblet-hyperplasia-to-mucin-hypersecretion

Goblet cell hyperplasia leads to mucin hypersecretion

PAS staining measured goblet cell hyperplasia and mucus secretion as one endpoint in both trachea and lung, and the paper separately reports that PM exposure enhanced mucus secretion with enlarged submucosal mucous glands, which fucoidans dose-dependently reversed (Figure 11). The submucosal gland observation is the paper's only separate evidence for the secretory side and is qualitative, with no score or magnitude, so this relationship is recorded with weak support.

Furthermore, PM exposure enhanced mucus secretion with enlarged submucosal mucous glands in OVA-sensitized mice (Figure 11).
SUPPORT MODEL ORGANISM PMID:32580518

The downstream event of this relationship as the paper reports it, separately from the PAS positive cell proportion that measures the upstream goblet cell hyperplasia.

Interestingly, fucoidans were found to attenuate goblet cell hyperplasia, enlargement of submucosal glands, and mucus hypersecretion.
SUPPORT MODEL ORGANISM PMID:32580518

Shows the upstream and downstream events of this relationship moving together under treatment, which is the paper's basis for linking them.

KER:herath-mucin-hypersecretion-to-lung-function

Mucin hypersecretion leads to decreased lung function

The adverse-outcome end of the pathway. Airway hyper-responsiveness measured as Penh rose in the PM only, OVA only and OVA + PM groups and fell by 43.0% with high-dose fucoidans, alongside the fall in PAS positive cells; the paper argues the mechanism from the clinical literature - mucus plugs obstructing the airways and mediators inducing bronchoconstriction - rather than testing it, so support is weak.

Accumulation of a mucus plug in the airways is observed in patients with lung inflammatory diseases, and this leads to obstruction and failure of respiration.
SUPPORT MODEL ORGANISM PMID:32580518

The mechanism the paper gives for this relationship: accumulated mucus obstructs the airway and impairs respiration.

These mediators further induce bronchoconstriction and mucus hypersecretion [30].
SUPPORT MODEL ORGANISM PMID:32580518

Places bronchoconstriction - the functional loss measured here as Penh - alongside mucus hypersecretion under the same mast cell mediators.

KER:herath-airway-inflammation-to-lung-function

Airway inflammation leads to decreased lung function

Airway inflammation (increased) → indirectly leads to → Decreased lung function (decreased) moderate support

Eosinophil influx is the specific inflammatory step the paper places upstream of airway hyper-responsiveness, and both were measured here: Congo red eosinophil counts rose 500.0% in the trachea and 566.6% in the lungs of OVA + PM mice, while Penh rose significantly over the healthy control in the same groups and fell 43.0% under high-dose fucoidans. The link is argued from the pattern and the literature rather than from an intervention that separates the two, so support is moderate.

Among the infiltrated inflammatory cells, an influx of eosinophils was particularly observed in asthma conditions, establishing pulmonary inflammation and airway hyper-responsiveness.
SUPPORT MODEL ORGANISM PMID:32580518

States the relationship recorded here: the eosinophil influx this paper measures establishes both pulmonary inflammation and airway hyper-responsiveness.

Depletion of CD4+ T cells attenuated airway hyperresponsiveness and lung eosinophil count in a CD4 antigen induced mouse model [25].
SUPPORT MODEL ORGANISM PMID:32580518

The intervention evidence the paper cites for this relationship, from a different study rather than from its own arms - which is why the support is moderate and the relationship indirect.

Protocols

PROTOCOL:herath-mouse-model-001

PM-exacerbated mouse model of allergic airway inflammation

Mice (n = 7 per group) randomly divided into seven groups: healthy control, PM only, OVA only, OVA + PM, OVA + PM + fucoidans (100 mg/kg), OVA + PM + fucoidans (400 mg/kg), and OVA + PM + prednisone (5 mg/kg). Mice in the OVA induction groups were sensitised with OVA (10 ug) dissolved in 200 uL saline and 2 mg Al(OH)3 by intraperitoneal injection. Two weeks after sensitisation, mice in groups other than the healthy control and OVA only groups were nebulised with PM (5 mg/m3, 30 min/day) daily for 7 consecutive days. Together with PM exposure the PM-exposed mice were orally gavaged with either a low dose (100 mg/kg) or high dose (400 mg/kg) of fucoidans, or prednisone (5 mg/kg), suspended in saline; other groups were orally administered saline. The protocol follows a previously described model with minor modifications. Fucoidans were supplied by Haewon Biotech Co., Ltd. (Seoul, Korea). PM was certified reference material (CRM) No. 28 urban aerosol from the National Institute for Environmental Studies (NIES), Japan, the majority of which was <2.5 um in diameter. Animal experiments were performed in accordance with the Guidelines for the Care and Use of Laboratory Animals of the Institutional Ethical Committee of Jeju National University.

quality control criteria: Mice randomly allocated to the seven groups; healthy control and OVA only groups were not nebulised with PM, and all non-treatment groups received oral saline so that gavage itself was matched across groups.
PROTOCOL:herath-tissue-prep-001

Trachea and lung fixation, embedding and sectioning

Mice were sacrificed one day after the final exposure to PM (day 22) and lung and trachea sections were fixed in 10% formalin. After fixation, samples were embedded in paraffin and sectioned at 3 um onto coated glasses.

PROTOCOL:herath-lung-homogenate-001

Lung tissue homogenisation for lipid peroxidation and cytokine assays

Lung tissues homogenised using a tacoPrep bead beater (GeneReach Biotechnology Co., Taichung City, Taiwan) in RIPA buffer containing protease inhibitors (2 mM Na3VO4, 1 mM PMSF, 10 ug/mL aprotinin, 10 ug/mL leupeptin). The homogenate was centrifuged at 3000x g for 10 min at 4 C and the supernatant used for assay; protein concentration in the supernatant was measured by the Bradford protein assay method.

PROTOCOL:herath-serum-prep-001

Serum separation from cardiac-puncture blood

Blood was collected from anaesthetised mice on day 22 via cardiac puncture using a heparinised syringe. Serum was separated from blood cells by centrifuging the collected blood at 12,000 rpm for 10 min at 4 C.

PROTOCOL:herath-balf-collection-001

Bronchoalveolar lavage fluid collection

1 mL of DPBS was instilled into the lungs (intra-tracheal) using a cannula and BALF gently collected. For differential cell counts the collected BALF was centrifuged at 300x g for 5 min at 4 C and the supernatant separated for cytokine analysis; for the cytokine ELISAs reported in the Methods the collected BALF was centrifuged at 12,000 rpm for 10 min at 4 C and the supernatant analysed.

PROTOCOL:herath-mda-lung-001

Thiobarbituric acid assay for lipid peroxidation in lung homogenate

An equal amount of protein from the lung homogenate supernatant was mixed with 10% (w/v) trichloroacetic acid and incubated for 10 min at 4 C. After centrifuging at 2000x g for 15 min at 4 C the resulting supernatant was reacted with an equal volume of 0.67% (w/v) thiobarbituric acid in a heating block for 10 min. The supernatant was separated by centrifuging at 2000x g for 15 min at 4 C and its absorbance measured at 532 nm using a microplate reader. The malondialdehyde (MDA) content in the samples was measured with the predetermined MDA standard curve.

Equipment: tacoPrep bead beater (GeneReach Biotechnology Co., Taichung City, Taiwan); Microplate reader, absorbance at 532 nm

PROTOCOL:herath-mda-serum-001

Lipid peroxidation assay kit for serum malondialdehyde

type: MolecularAssayProtocol

The MDA level in mouse serum was measured using a lipid peroxidation assay kit following the manufacturer's instructions. MDA activity was measured at the micromolar level based on the standard curve using a colorimetric assay.

detection method: Colorimetric lipid peroxidation assay kit, quantified against an MDA standard curve
PROTOCOL:herath-elisa-8ohdg

DNA/RNA oxidative damage ELISA for serum 8-OHdG

type: MolecularAssayProtocol

Serum 8-OHdG-acetylcholinesterase conjugate (DNA/RNA oxidative damage tracer) measured with the DNA/RNA oxidative damage ELISA kit (Cayman Chemicals, Ann Arbor, MI, USA) following the manufacturer's recommendations.

detection method: DNA/RNA oxidative damage ELISA kit (Cayman Chemicals)
PROTOCOL:herath-plethysmography-001

Whole-body plethysmography with methacholine challenge

type: SpirometryProtocol

After 24 h of the final challenge with PM the mice were nebulised with different concentrations of methacholine (0, 12.5, 25, 50 mg/mL) for 10 min in a whole body chamber. Immediately after each nebulisation the enhanced pause (Penh) was measured in a plethysmography chamber (Allmedicus, Anyang, Korea). The readings were averaged for a 3 min period.

spirometry standard: Enhanced pause (Penh) in a plethysmography chamber (Allmedicus, Anyang, Korea) bronchodilator agent: acetyl-beta-methylcholine (methacholine) aerosol challenge at 0, 12.5, 25 and 50 mg/mL plethysmography method: whole-body plethysmography, readings averaged over 3 min
PROTOCOL:herath-balf-diffquick-001

Diff Quick differential cell count on BALF smears

type: StainingProtocol

The collected BALF was centrifuged (300x g, 5 min, at 4 C) and the supernatant separated for cytokine analysis. The cells were fixed in methanol and smears prepared on glass slides. The smears were stained with a Diff Quick staining kit (Sysmex Corporation, Kobe, Japan) and the cell compositions of macrophages, eosinophils, neutrophils, lymphocytes and basophils determined using a microscope with an Olympus DP-72 microscope camera (Olympus, Tokyo, Japan).

staining type: Diff Quick fixation method: methanol-fixed smears detection method: Light microscopy with Olympus DP-72 camera; differential count of macrophages, eosinophils, neutrophils, lymphocytes and basophils
PROTOCOL:herath-he-001

Haematoxylin and eosin staining with inflammation grading

type: StainingProtocol

Tissue sections were stained with haematoxylin and eosin (H&E) and observed under a light microscope (Olympus, Tokyo, Japan) for histopathological examinations. Inflammation in trachea and lung sections was scored as follows: 0, normal; 1, few inflammatory cells infiltrated; 2, observed inflammatory cells one cell layer deep; 3, observed inflammatory cells 2-4 cell layers deep; and 4, infiltrated inflammatory cells of more than four cell layers deep.

staining type: H&E fixation method: 10% formalin, paraffin embedding, 3 um sections detection method: Light microscopy; ordinal 0-4 inflammatory activity grade
PROTOCOL:herath-congored-001

Congo red staining for eosinophil infiltration

type: StainingProtocol

Infiltration of eosinophils in the lung and trachea tissue sections was confirmed by Congo red staining. Deparaffinised tissues were immersed in Congo red working solution for 30 min, washed in running tap water and counterstained with 0.5% methyl green. Stained sections were observed under a microscope and representative areas captured using an Olympus DP-72 microscope camera (Olympus, Tokyo, Japan). The number of Congo red stained eosinophils per site from at least three sites of each section (3 sections were taken from each mouse) was quantified using ImageJ (v1.46) software.

staining type: Congo red counterstain: 0.5% methyl green detection method: Light microscopy; eosinophils per site counted in ImageJ v1.46 from at least three sites per section, three sections per mouse replicate requirements: 3
PROTOCOL:herath-toluidine-001

Toluidine blue staining for mast cell count and degranulation

type: StainingProtocol

Mast cell infiltration in the trachea was evaluated using toluidine blue staining. Deparaffinised trachea sections were immersed in 0.5% toluidine blue solution and counterstained with 0.5% methyl green. Stained sections were observed under a microscope and representative areas captured using an Olympus DP-72 microscope camera (Olympus, Tokyo, Japan). The number of mast cells per site and the number of degranulated mast cells per site from at least three sites of each section (3 sections were taken from each mouse) were quantified using ImageJ (v1.46) software.

staining type: toluidine blue counterstain: 0.5% methyl green detection method: Light microscopy; mast cells per site and degranulated mast cells per site counted in ImageJ v1.46 replicate requirements: 3
PROTOCOL:herath-pas-001

Periodic acid-Schiff staining for goblet cells and mucus secretion

type: StainingProtocol

Trachea and lung sections were stained with periodic acid-Schiff (PAS) and counterstained with 0.5% methyl green to evaluate goblet cell metaplasia and mucus secretion. The PAS-positive cell percentage from at least three sites of each section (3 sections were taken from each mouse) was quantified using ImageJ (v1.46) software.

staining type: PAS counterstain: 0.5% methyl green detection method: Light microscopy; PAS-positive cell percentage quantified in ImageJ v1.46 replicate requirements: 3
PROTOCOL:herath-ihc-mda

Immunohistochemistry for malondialdehyde adducts

type: StainingProtocol

Trachea and lung sections on glass slides were de-paraffinised in a xylene series and rehydrated in an ethanol series. Nonspecific binding was blocked by immersing tissues in 0.3% hydrogen peroxide with rabbit or horse serum for 30 min. Following blocking, tissues were incubated with MDA antibody (1:400) overnight at 4 C. After washing, tissues were incubated with biotinylated anti-rat IgG or anti-rabbit IgG for 45 min followed by treatment with an avidin-biotin peroxidase complex using the Vectastain Elite ABC kit (Vector Inc., Burlingame, CA, USA). HRP binding sites were detected with 3,3'-diaminobenzidine (DAB, Vector Inc.). Images were captured using an Olympus DP-72 microscope camera (Olympus, Tokyo, Japan). The number of positive cells per site from at least three sites of each section (3 sections were taken from each mouse) was acquired with ImageJ (v1.46) software.

staining type: immunohistochemistry detection method: Avidin-biotin peroxidase complex (Vectastain Elite ABC kit) with 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46 replicate requirements: 3
PROTOCOL:herath-ihc-gr1

Immunohistochemistry for Gr-1+ granulocytes

type: StainingProtocol

As for the MDA immunohistochemistry protocol, with mouse Gr-1 antibody (1:200) as the overnight primary antibody; the paper states the secondary step as a disjunction - biotinylated anti-rat IgG or anti-rabbit IgG for 45 min - without saying which goes with which primary, so no assignment is made here.

staining type: immunohistochemistry detection method: Avidin-biotin peroxidase complex (Vectastain Elite ABC kit) with 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46 replicate requirements: 3
PROTOCOL:herath-ihc-f480

Immunohistochemistry for F4/80+ macrophages

type: StainingProtocol

As for the MDA immunohistochemistry protocol, with purified anti-mouse F4/80 antibody (1:200) as the overnight primary antibody; the paper states the secondary step as a disjunction - biotinylated anti-rat IgG or anti-rabbit IgG for 45 min - without saying which goes with which primary, so no assignment is made here.

staining type: immunohistochemistry detection method: Avidin-biotin peroxidase complex (Vectastain Elite ABC kit) with 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46 replicate requirements: 3
PROTOCOL:herath-ihc-cd4

Immunohistochemistry for CD4+ T lymphocytes

type: StainingProtocol

As for the MDA immunohistochemistry protocol, with anti-CD4 antibody (1:400) as the overnight primary antibody; the paper states the secondary step as a disjunction - biotinylated anti-rat IgG or anti-rabbit IgG for 45 min - without saying which goes with which primary, so no assignment is made here.

staining type: immunohistochemistry detection method: Avidin-biotin peroxidase complex (Vectastain Elite ABC kit) with 3,3'-diaminobenzidine; positive cells per site counted in ImageJ v1.46 replicate requirements: 3
PROTOCOL:herath-elisa-total-ige

ELISA for total serum IgE

type: MolecularAssayProtocol

Total IgE in serum measured with an ELISA kit (Bethyl Lab, Montgomery, TX, USA) following the manufacturer's recommendations.

detection method: ELISA, total IgE kit (Bethyl Lab, Montgomery, TX, USA)
PROTOCOL:herath-elisa-ova-ige

ELISA for OVA-specific serum IgE

type: MolecularAssayProtocol

OVA-specific IgE in serum measured with an ELISA kit (BioLegend, San Diego, CA, USA) following the manufacturer's recommendations.

detection method: ELISA, OVA-specific IgE kit (BioLegend, San Diego, CA, USA)
PROTOCOL:herath-elisa-ova-igg1

ELISA for OVA-specific serum IgG1

type: MolecularAssayProtocol

OVA-specific IgG1 measured with an ELISA kit (Cayman Chemicals, Ann Arbor, MI, USA) on serum diluted 1:2000, following the manufacturer's recommendations.

detection method: ELISA, OVA-specific IgG1 kit (Cayman Chemicals); serum diluted 1:2000
PROTOCOL:herath-elisa-ova-igg2a

ELISA for OVA-specific serum IgG2a

type: MolecularAssayProtocol

OVA-specific IgG2a measured with an ELISA kit (BioLegend, San Diego, CA, USA) following the manufacturer's recommendations.

detection method: ELISA, OVA-specific IgG2a kit (BioLegend, San Diego, CA, USA)
PROTOCOL:herath-elisa-cytokines

ELISA for IL-4, IL-17a and IL-33 in serum, BALF and lung homogenate

type: MolecularAssayProtocol

IL-4 and IL-17a measured with ELISA kits from BioLegend (San Diego, CA, USA) and IL-33 with the Mouse IL-33 ELISA kit (Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA), each following the manufacturer's recommendations. The same three kits were applied to serum, to BALF supernatant and to lung homogenate supernatant.

detection method: ELISA; IL-4 and IL-17a kits (BioLegend), Mouse IL-33 kit (Invitrogen)