Subchronic inhalation of coal dust particulate matter 10 induces bronchoalveolar hyperplasia and decreases MUC5AC expression in male Wistar rats.

Rattus norvegicus coal dust

Study subjects

SUBJECT:kania-wistar-rat-14d

Male Wistar rat, 14-day coal dust exposure

type: InVivoSubject Rattus norvegicus NCBITaxon:10116 sex: male

Male Wistar rats exposed to coal dust PM10 for 14 days; the abstract reports no age, weight or group size.

SUBJECT:kania-wistar-rat-28d

Male Wistar rat, 28-day coal dust exposure

type: InVivoSubject Rattus norvegicus NCBITaxon:10116 sex: male

Male Wistar rats exposed to coal dust PM10 for 28 days; the abstract reports no age, weight or group size.

SUBJECT:kania-wistar-rat-histology

Male Wistar rat, coal dust exposure, lung histology

type: InVivoSubject Rattus norvegicus NCBITaxon:10116 sex: male

Male Wistar rats exposed to coal dust PM10 for 14 or 28 days; the abstract reports no age, weight or group size.

Goblet cell assays

GCM:kania-muc5ac-clsm-14d

MUC5AC expression by CLSM - coal dust PM10, 14 days

MUC5AC expression in male Wistar rat lung measured by confocal laser scanning microscopy after 14 days of coal dust PM10 inhalation at 6.25, 12.5 and 25 mg/m3. The paper reports no significant difference in MUC5AC expression for the 14-day exposure (p>0.05). No measurement values, group sizes or exact p-values are given in the available abstract, so the output records below carry no measurement slots.

Exposure conditions

ConditionAgentConcentrationDuration
Coal dust PM10, 6.25 mg/m3, 14 days
EXPOSURE:kania-coaldust-6p25mgm3-14d
coal dust
ENVO:02000099
6.25 milligram per cubic meter 14 day
Coal dust PM10, 12.5 mg/m3, 14 days
EXPOSURE:kania-coaldust-12p5mgm3-14d
coal dust
ENVO:02000099
12.5 milligram per cubic meter 14 day
Coal dust PM10, 25 mg/m3, 14 days
EXPOSURE:kania-coaldust-25mgm3-14d
coal dust
ENVO:02000099
25 milligram per cubic meter 14 day

Outputs

GroupOutputDescription
treated MUC5AC, 6.25 mg/m3, 14 days
GCM:kania-muc5ac-clsm-14d-output-6p25 · under EXPOSURE:kania-coaldust-6p25mgm3-14d
treated MUC5AC, 12.5 mg/m3, 14 days
GCM:kania-muc5ac-clsm-14d-output-12p5 · under EXPOSURE:kania-coaldust-12p5mgm3-14d
treated MUC5AC, 25 mg/m3, 14 days
GCM:kania-muc5ac-clsm-14d-output-25 · under EXPOSURE:kania-coaldust-25mgm3-14d

Evidence

There was no significant difference in MUC5AC, EGF, and EGFR expressions for 14-d exposure (p>0.05).
SUPPORT MODEL ORGANISM PMID:24975055

This sentence is the paper's entire statistical result for MUC5AC at 14 days and is what the null finding recorded on this assay rests on.

EGFR and MUC5AC were measured by a confocal laser scanning microscope.
SUPPORT MODEL ORGANISM PMID:24975055

Names the measurement technique this assay records, matching the confocal microscopy protocol it follows.

GCM:kania-muc5ac-clsm-28d

MUC5AC expression by CLSM - coal dust PM10, 28 days

MUC5AC expression in male Wistar rat lung measured by confocal laser scanning microscopy after 28 days of coal dust PM10 inhalation at 6.25, 12.5 and 25 mg/m3. The paper reports a significant difference in MUC5AC expression for the 28-day exposure (p<0.05) and its conclusion states the direction is a decrease. Only the significance threshold is reported - no measurement values, group sizes or exact p-values are given in the available abstract.

Exposure conditions

ConditionAgentConcentrationDuration
Coal dust PM10, 6.25 mg/m3, 28 days
EXPOSURE:kania-coaldust-6p25mgm3-28d
coal dust
ENVO:02000099
6.25 milligram per cubic meter 28 day
Coal dust PM10, 12.5 mg/m3, 28 days
EXPOSURE:kania-coaldust-12p5mgm3-28d
coal dust
ENVO:02000099
12.5 milligram per cubic meter 28 day
Coal dust PM10, 25 mg/m3, 28 days
EXPOSURE:kania-coaldust-25mgm3-28d
coal dust
ENVO:02000099
25 milligram per cubic meter 28 day

Outputs

GroupOutputDescription
treated MUC5AC, 6.25 mg/m3, 28 days
GCM:kania-muc5ac-clsm-28d-output-6p25 · under EXPOSURE:kania-coaldust-6p25mgm3-28d
treated MUC5AC, 12.5 mg/m3, 28 days
GCM:kania-muc5ac-clsm-28d-output-12p5 · under EXPOSURE:kania-coaldust-12p5mgm3-28d
treated MUC5AC, 25 mg/m3, 28 days
GCM:kania-muc5ac-clsm-28d-output-25 · under EXPOSURE:kania-coaldust-25mgm3-28d

Evidence

There was no significant difference in EGF and EGFR expressions for 28-d exposure (p>0.05), but there was a significant difference in MUC5AC expression (p<0.05).
SUPPORT MODEL ORGANISM PMID:24975055

States the significant MUC5AC result at 28 days that this assay records, together with the p<0.05 threshold reported for it.

We concluded that subchronic inhalation of coal dust particulate matter 10 induces bronchoalveolar reactive hyperplasia and rearrangement of epithelial cells which accompanied by decrease expression MUC5AC in male rats.
SUPPORT MODEL ORGANISM PMID:24975055

The paper's own conclusion gives the direction of the significant MUC5AC change as a decrease, which is why this assay informs on the decreased-MUC5AC key event.

GCM:kania-goblet-histology

Bronchoalveolar goblet cell hyperplasia by histology - coal dust PM10

Histological examination of the bronchoalveolar epithelium of male Wistar rats exposed to coal dust PM10 for 14 and 28 days. The paper describes epithelial rearrangement, hyperplastic (metaplastic) goblet cells and scattered massive inflammatory cells, and its conclusion calls this bronchoalveolar reactive hyperplasia. The finding is qualitative: no goblet cell counts, percentages or scores are reported in the available abstract.

Exposure conditions

ConditionAgentConcentrationDuration
Coal dust PM10, 25 mg/m3, 14 days
EXPOSURE:kania-coaldust-25mgm3-14d
coal dust
ENVO:02000099
25 milligram per cubic meter 14 day
Coal dust PM10, 25 mg/m3, 28 days
EXPOSURE:kania-coaldust-25mgm3-28d
coal dust
ENVO:02000099
25 milligram per cubic meter 28 day

Outputs

GroupOutputDescription
treated Bronchoalveolar epithelial histology, 14 days
GCM:kania-goblet-histology-output-14d · under EXPOSURE:kania-coaldust-25mgm3-14d
treated Bronchoalveolar epithelial histology, 28 days
GCM:kania-goblet-histology-output-28d · under EXPOSURE:kania-coaldust-25mgm3-28d

Evidence

The bronchoalveolar epithelial image of the group exposed to coal dust for 14 and 28 days showed a epithelial rearrangement, hyperplastic (metaplastic) goblet cells, and scattered massive inflammatory cells.
SUPPORT MODEL ORGANISM PMID:24975055

Records the goblet cell hyperplasia observed in coal-dust-exposed rats at both exposure durations, which is the key event this assay informs on.

The pulmonary parenchymal image of the group of exposed to coal dust for 14 and 28 days showed scattered inflammatory cells filling up the pulmonary alveolar networks, leading to an appearance of thickened parenchymal alveoli until emphysema-like structure.
SUPPORT MODEL ORGANISM PMID:24975055

Describes the accompanying parenchymal inflammation and alveolar thickening recorded in this assay's description, establishing the tissue context of the hyperplastic response.

EGFR signaling assays

EGFR:kania-egfr-egf-14d

EGFR and EGF expression - coal dust PM10, 14 days

EGFR expression measured by confocal laser scanning microscopy and EGF expression measured by ELISA in male Wistar rat lung after 14 days of coal dust PM10 inhalation at 6.25, 12.5 and 25 mg/m3. The paper reports no significant difference in either EGF or EGFR expression for the 14-day exposure (p>0.05). No measurement values, group sizes or exact p-values are reported in the available abstract.

Exposure conditions

ConditionAgentConcentrationDuration
Coal dust PM10, 6.25 mg/m3, 14 days
EXPOSURE:kania-coaldust-6p25mgm3-14d
coal dust
ENVO:02000099
6.25 milligram per cubic meter 14 day
Coal dust PM10, 12.5 mg/m3, 14 days
EXPOSURE:kania-coaldust-12p5mgm3-14d
coal dust
ENVO:02000099
12.5 milligram per cubic meter 14 day
Coal dust PM10, 25 mg/m3, 14 days
EXPOSURE:kania-coaldust-25mgm3-14d
coal dust
ENVO:02000099
25 milligram per cubic meter 14 day

Outputs

GroupOutputDescription
treated EGFR and EGF, 6.25 mg/m3, 14 days
EGFR:kania-egfr-egf-14d-output-6p25 · under EXPOSURE:kania-coaldust-6p25mgm3-14d
treated EGFR and EGF, 12.5 mg/m3, 14 days
EGFR:kania-egfr-egf-14d-output-12p5 · under EXPOSURE:kania-coaldust-12p5mgm3-14d
treated EGFR and EGF, 25 mg/m3, 14 days
EGFR:kania-egfr-egf-14d-output-25 · under EXPOSURE:kania-coaldust-25mgm3-14d

Evidence

There was no significant difference in MUC5AC, EGF, and EGFR expressions for 14-d exposure (p>0.05).
SUPPORT MODEL ORGANISM PMID:24975055

This is the paper's statistical result for EGF and EGFR at 14 days and is the null finding this assay records.

EGF expressions in rat lungs were measured by ELISA.
SUPPORT MODEL ORGANISM PMID:24975055

Names the technique used for the EGF ligand measurement this assay records, matching the ELISA protocol it follows.

EGFR:kania-egfr-egf-28d

EGFR and EGF expression - coal dust PM10, 28 days

EGFR expression measured by confocal laser scanning microscopy and EGF expression measured by ELISA in male Wistar rat lung after 28 days of coal dust PM10 inhalation at 6.25, 12.5 and 25 mg/m3. The paper reports no significant difference in either EGF or EGFR expression for the 28-day exposure (p>0.05), in contrast to the significant MUC5AC change at the same timepoint. No measurement values, group sizes or exact p-values are reported in the available abstract.

Exposure conditions

ConditionAgentConcentrationDuration
Coal dust PM10, 6.25 mg/m3, 28 days
EXPOSURE:kania-coaldust-6p25mgm3-28d
coal dust
ENVO:02000099
6.25 milligram per cubic meter 28 day
Coal dust PM10, 12.5 mg/m3, 28 days
EXPOSURE:kania-coaldust-12p5mgm3-28d
coal dust
ENVO:02000099
12.5 milligram per cubic meter 28 day
Coal dust PM10, 25 mg/m3, 28 days
EXPOSURE:kania-coaldust-25mgm3-28d
coal dust
ENVO:02000099
25 milligram per cubic meter 28 day

Outputs

GroupOutputDescription
treated EGFR and EGF, 6.25 mg/m3, 28 days
EGFR:kania-egfr-egf-28d-output-6p25 · under EXPOSURE:kania-coaldust-6p25mgm3-28d
treated EGFR and EGF, 12.5 mg/m3, 28 days
EGFR:kania-egfr-egf-28d-output-12p5 · under EXPOSURE:kania-coaldust-12p5mgm3-28d
treated EGFR and EGF, 25 mg/m3, 28 days
EGFR:kania-egfr-egf-28d-output-25 · under EXPOSURE:kania-coaldust-25mgm3-28d

Evidence

There was no significant difference in EGF and EGFR expressions for 28-d exposure (p>0.05), but there was a significant difference in MUC5AC expression (p<0.05).
SUPPORT MODEL ORGANISM PMID:24975055

States the null EGF and EGFR result at 28 days that this assay records, and separates it from the significant MUC5AC change at the same timepoint.

The purpose of the present study was to evaluate the effects of PM10 coal dust on lung histology, MUC5AC expression, epidermal growth factor (EGF) expression, and epidermal growth factor receptor (EGFR) expression.
SUPPORT MODEL ORGANISM PMID:24975055

Confirms that EGF and EGFR expression were prespecified endpoints of the study rather than incidental observations, which is what this assay's two measured targets represent.

Response comparisons

COMP:kania-muc5ac-14d

MUC5AC expression after 14-day coal dust exposure

Paper reports no significant difference (p>0.05) for MUC5AC at 14 days. No values, exact p-value or comparator group values are given in the available abstract, so only the direction is recorded.

measurement: muc5ac_protein_expression direction: no_change derivation: reported in paper from assay: GCM:kania-muc5ac-clsm-14d
COMP:kania-muc5ac-28d

MUC5AC expression after 28-day coal dust exposure

Paper reports a significant difference for MUC5AC at 28 days (p<0.05) and its conclusion states the direction is a decrease. No values, exact p-value or comparator group values are given in the available abstract, so change_value is omitted.

measurement: muc5ac_protein_expression direction: decreased derivation: reported in paper from assay: GCM:kania-muc5ac-clsm-28d
COMP:kania-egfr-14d

EGFR expression after 14-day coal dust exposure

Paper reports no significant difference (p>0.05) for EGFR at 14 days. No values or exact p-value are given in the available abstract.

measurement: total_egfr_protein direction: no_change derivation: reported in paper from assay: EGFR:kania-egfr-egf-14d
COMP:kania-egfr-28d

EGFR expression after 28-day coal dust exposure

Paper reports no significant difference (p>0.05) for EGFR at 28 days. No values or exact p-value are given in the available abstract.

measurement: total_egfr_protein direction: no_change derivation: reported in paper from assay: EGFR:kania-egfr-egf-28d
COMP:kania-egf-14d

EGF expression after 14-day coal dust exposure

Paper reports no significant difference (p>0.05) for EGF at 14 days. No values or exact p-value are given in the available abstract.

measurement: egfr_ligand_expression direction: no_change derivation: reported in paper from assay: EGFR:kania-egfr-egf-14d
COMP:kania-egf-28d

EGF expression after 28-day coal dust exposure

Paper reports no significant difference (p>0.05) for EGF at 28 days. No values or exact p-value are given in the available abstract.

measurement: egfr_ligand_expression direction: no_change derivation: reported in paper from assay: EGFR:kania-egfr-egf-28d

Protocols

PROTOCOL:kania-inhalation-001

Subchronic coal dust PM10 inhalation exposure

Subchronic inhalation exposure of male Wistar rats to coal dust particulate matter 10 at 6.25, 12.5 and 25 mg/m3 for 14 or 28 days. The abstract does not report chamber type, daily exposure hours, particle characterisation or group sizes.

Equipment: Coal dust PM10 inhalation exposure apparatus

PROTOCOL:kania-elisa-001

ELISA for EGF in rat lung

Epidermal growth factor (EGF) expression in rat lungs measured by enzyme-linked immunosorbent assay. The abstract does not report kit manufacturer, dilutions or standard curve details.

Equipment: ELISA plate reader

PROTOCOL:kania-clsm-001

Confocal laser scanning microscopy for EGFR and MUC5AC

EGFR and MUC5AC expression measured by a confocal laser scanning microscope on rat lung tissue. The abstract does not report antibodies, dilutions or the quantification method.

Equipment: Confocal laser scanning microscope

PROTOCOL:kania-histology-001

Lung histology of bronchoalveolar epithelium and pulmonary parenchyma

Histological examination of the bronchoalveolar epithelial and pulmonary parenchymal images of rat lung after 14 and 28 days of coal dust exposure. The abstract does not name the stain used or a scoring scheme.

Equipment: Light microscope