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Class: ChemicalEntity

A chemical compound used as a toxicant in the study.

URI: zebrafish_toxicology_atlas_schema:ChemicalEntity

classDiagram class ChemicalEntity click ChemicalEntity href "../ChemicalEntity" NamedThing <|-- ChemicalEntity click NamedThing href "../NamedThing" ChemicalEntity : id ChemicalEntity : name

Inheritance

Slots

Name Cardinality and Range Description Inheritance
name 0..1
String		 Name of the chemical direct
id 1
String		 CHEBI identifier for the chemical NamedThing

Usages

used by used in type used
ExposureEvent exposure_substance range ChemicalEntity

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema

Mappings

Mapping Type Mapped Value
self zebrafish_toxicology_atlas_schema:ChemicalEntity
native zebrafish_toxicology_atlas_schema:ChemicalEntity
exact biolink:ChemicalEntity

LinkML Source

Direct

name: ChemicalEntity
description: A chemical compound used as a toxicant in the study.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
exact_mappings:
- biolink:ChemicalEntity
is_a: NamedThing
slots:
- name
slot_usage:
  id:
    name: id
    description: CHEBI identifier for the chemical.
    pattern: ^CHEBI:\d+$
  name:
    name: name
    description: Name of the chemical.

Induced

name: ChemicalEntity
description: A chemical compound used as a toxicant in the study.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
exact_mappings:
- biolink:ChemicalEntity
is_a: NamedThing
slot_usage:
  id:
    name: id
    description: CHEBI identifier for the chemical.
    pattern: ^CHEBI:\d+$
  name:
    name: name
    description: Name of the chemical.
attributes:
  name:
    name: name
    description: Name of the chemical.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: name
    owner: ChemicalEntity
    domain_of:
    - NamedThing
    - Allele
    - Gene
    - ChemicalEntity
    - DevelopmentalStage
    range: string
  id:
    name: id
    description: CHEBI identifier for the chemical.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    identifier: true
    alias: id
    owner: ChemicalEntity
    domain_of:
    - NamedThing
    range: string
    required: true
    pattern: ^CHEBI:\d+$