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Class: SexTerm

A term stating the sex of the organisms to which a biological observation or claim applies, from the AOP-Wiki's fixed list: male, female, mixed, asexual, third gender, hermaphrodite, or unspecific. In EMOD a sex term can be attached to a line of evidence or to an applicability statement on an AOP, Key Event, or Key Event Relationship. An applicability statement may be asserted during AOP development, or derived from the sexes recorded on cited evidence; where evidence is cited, the sex claimed can be traced to an Observation.

URI: http://example.org/aopwiki-emod/SexTerm

classDiagram class SexTerm click SexTerm href "../SexTerm/" SexTerm : created_at SexTerm : id SexTerm : term SexTerm --> "0..1" SexTermEnum : term click SexTermEnum href "../SexTermEnum/" SexTerm : updated_at

Slots

Name Cardinality and Range Description Inheritance
created_at 0..1
Datetime		 Timestamp of when the record was created direct
updated_at 0..1
Datetime		 Timestamp of when the record was last updated direct
id 0..1
Integer		 direct
term 0..1
SexTermEnum		 direct

Usages

used by used in type used
Evidence sex_term_id range SexTerm
AopToSex sex_term_id range SexTerm
EventToSex sex_term_id range SexTerm
KeRelationshipToSex sex_term_id range SexTerm

Identifier and Mapping Information

Schema Source

  • from schema: http://example.org/aopwiki-emod

Mappings

Mapping Type Mapped Value
self http://example.org/aopwiki-emod/SexTerm
native http://example.org/aopwiki-emod/SexTerm

LinkML Source

Direct

name: SexTerm
description: 'A term stating the sex of the organisms to which a biological observation
  or claim applies, from the AOP-Wiki''s fixed list: male, female, mixed, asexual,
  third gender, hermaphrodite, or unspecific. In EMOD a sex term can be attached to
  a line of evidence or to an applicability statement on an AOP, Key Event, or Key
  Event Relationship. An applicability statement may be asserted during AOP development,
  or derived from the sexes recorded on cited evidence; where evidence is cited, the
  sex claimed can be traced to an Observation.'
from_schema: http://example.org/aopwiki-emod
slots:
- created_at
- updated_at
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    - User
    range: integer
  term:
    name: term
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - CellTerm
    - ConfidenceLevel
    - Directness
    - LifeStageTerm
    - OrganTerm
    - SexTerm
    - TaxonTerm
    range: SexTermEnum

Induced

name: SexTerm
description: 'A term stating the sex of the organisms to which a biological observation
  or claim applies, from the AOP-Wiki''s fixed list: male, female, mixed, asexual,
  third gender, hermaphrodite, or unspecific. In EMOD a sex term can be attached to
  a line of evidence or to an applicability statement on an AOP, Key Event, or Key
  Event Relationship. An applicability statement may be asserted during AOP development,
  or derived from the sexes recorded on cited evidence; where evidence is cited, the
  sex claimed can be traced to an Observation.'
from_schema: http://example.org/aopwiki-emod
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    alias: id
    owner: SexTerm
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    - User
    range: integer
  term:
    name: term
    from_schema: http://example.org/aopwiki-emod
    alias: term
    owner: SexTerm
    domain_of:
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - CellTerm
    - ConfidenceLevel
    - Directness
    - LifeStageTerm
    - OrganTerm
    - SexTerm
    - TaxonTerm
    range: SexTermEnum
  created_at:
    name: created_at
    description: Timestamp of when the record was created
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: created_at
    owner: SexTerm
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    range: datetime
  updated_at:
    name: updated_at
    description: Timestamp of when the record was last updated
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: updated_at
    owner: SexTerm
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    range: datetime