Skip to content

Class: ExperimentSetup

URI: http://example.org/aopwiki-emod/ExperimentSetup

classDiagram class ExperimentSetup click ExperimentSetup href "../ExperimentSetup/" ExperimentSetup : assay_id ExperimentSetup --> "0..1" Assay : assay_id click Assay href "../Assay/" ExperimentSetup : causal_agent_id ExperimentSetup --> "0..1" Stressor : causal_agent_id click Stressor href "../Stressor/" ExperimentSetup : cell_terms ExperimentSetup --> "*" CellTerm : cell_terms click CellTerm href "../CellTerm/" ExperimentSetup : created_at ExperimentSetup : description ExperimentSetup : id ExperimentSetup : updated_at

Slots

Name Cardinality and Range Description Inheritance
created_at 0..1
Datetime		 Timestamp of when the record was created direct
updated_at 0..1
Datetime		 Timestamp of when the record was last updated direct
id 1
Integer		 direct
assay_id 0..1
Assay		 direct
causal_agent_id 0..1
Stressor		 direct
description 0..1
String		 direct
cell_terms *
CellTerm		 direct

Usages

used by used in type used
Observation experiment_setup_id range ExperimentSetup

Identifier and Mapping Information

Schema Source

  • from schema: http://example.org/aopwiki-emod

Mappings

Mapping Type Mapped Value
self http://example.org/aopwiki-emod/ExperimentSetup
native http://example.org/aopwiki-emod/ExperimentSetup

LinkML Source

Direct

name: ExperimentSetup
from_schema: http://example.org/aopwiki-emod
slots:
- created_at
- updated_at
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    identifier: true
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    - User
    range: integer
    required: true
  assay_id:
    name: assay_id
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Observation
    - ExperimentSetup
    range: Assay
    inlined: true
  causal_agent_id:
    name: causal_agent_id
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - ExperimentSetup
    range: Stressor
    inlined: true
  description:
    name: description
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Assay
    - BiologicalObject
    - BiologicalProcess
    - CellTerm
    - Directness
    - ExperimentSetup
    - License
    - OecdStatus
    - OrganTerm
  cell_terms:
    name: cell_terms
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - ExperimentSetup
    range: CellTerm
    multivalued: true
    inlined: true
    inlined_as_list: true

Induced

name: ExperimentSetup
from_schema: http://example.org/aopwiki-emod
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    identifier: true
    alias: id
    owner: ExperimentSetup
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    - User
    range: integer
    required: true
  assay_id:
    name: assay_id
    from_schema: http://example.org/aopwiki-emod
    alias: assay_id
    owner: ExperimentSetup
    domain_of:
    - Observation
    - ExperimentSetup
    range: Assay
    inlined: true
  causal_agent_id:
    name: causal_agent_id
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: causal_agent_id
    owner: ExperimentSetup
    domain_of:
    - ExperimentSetup
    range: Stressor
    inlined: true
  description:
    name: description
    from_schema: http://example.org/aopwiki-emod
    alias: description
    owner: ExperimentSetup
    domain_of:
    - Assay
    - BiologicalObject
    - BiologicalProcess
    - CellTerm
    - Directness
    - ExperimentSetup
    - License
    - OecdStatus
    - OrganTerm
    range: string
  cell_terms:
    name: cell_terms
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: cell_terms
    owner: ExperimentSetup
    domain_of:
    - ExperimentSetup
    range: CellTerm
    multivalued: true
    inlined: true
    inlined_as_list: true
  created_at:
    name: created_at
    description: Timestamp of when the record was created
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: created_at
    owner: ExperimentSetup
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    range: datetime
  updated_at:
    name: updated_at
    description: Timestamp of when the record was last updated
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: updated_at
    owner: ExperimentSetup
    domain_of:
    - Aop
    - Event
    - KeRelationship
    - Assay
    - Observation
    - Evidence
    - Stressor
    - Citation
    - BiologicalAction
    - BiologicalObject
    - BiologicalProcess
    - LevelOfBiologicalOrganization
    - AopToEvent
    - AopToLifeStage
    - AopToKeRelationship
    - AopToSex
    - AopToPrototypicalStressor
    - AopToTaxon
    - AssignedLicense
    - BioTargetFamily
    - CellTerm
    - ConfidenceLevel
    - Directness
    - EventToLifeStage
    - EventToSex
    - EventToTaxon
    - ExperimentSetup
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - OecdStatus
    - OrganTerm
    - KeRelationshipToLifeStage
    - KeRelationshipToSex
    - KeRelationshipToTaxon
    - SexTerm
    - EventComponent
    - TaxonTerm
    - TestGuideline
    range: datetime