Class: Assay

URI: http://example.org/aopwiki-emod/Assay

classDiagram class Assay click Assay href "../Assay/" Assay : batch_import_id Assay : bio_target_families Assay --> "*" AssayBioTargetFamily : bio_target_families click AssayBioTargetFamily href "../AssayBioTargetFamily/" Assay : biological_action_id Assay --> "0..1" BiologicalAction : biological_action_id click BiologicalAction href "../BiologicalAction/" Assay : citation_id Assay : created_at Assay : description Assay : detection_technology Assay : events Assay --> "*" Event : events click Event href "../Event/" Assay : external_assay_id Assay : id Assay : objects Assay --> "*" BiologicalObject : objects click BiologicalObject href "../BiologicalObject/" Assay : processes Assay --> "*" BiologicalProcess : processes click BiologicalProcess href "../BiologicalProcess/" Assay : taxon_terms Assay --> "*" TaxonTerm : taxon_terms click TaxonTerm href "../TaxonTerm/" Assay : title Assay : updated_at

Slots

Name	Cardinality and Range	Description	Inheritance
created_at	0..1 Datetime	Timestamp of when the record was created	direct
updated_at	0..1 Datetime	Timestamp of when the record was last updated	direct
id	1 Integer		direct
title	0..1 String		direct
description	0..1 String		direct
citation_id	0..1 String		direct
detection_technology	0..1 String		direct
biological_action_id	0..1 BiologicalAction		direct
external_assay_id	0..1 String		direct
batch_import_id	0..1 String		direct
objects	* BiologicalObject		direct
processes	* BiologicalProcess		direct
taxon_terms	* TaxonTerm		direct
events	* Event		direct
bio_target_families	* AssayBioTargetFamily		direct

Usages

used by	used in	type	used
Event	assays	range	Assay
Observation	assay_id	range	Assay
AssayBioTargetFamily	assay_id	range	Assay

Identifier and Mapping Information

Schema Source

from schema: http://example.org/aopwiki-emod

Mappings

Mapping Type	Mapped Value
self	http://example.org/aopwiki-emod/Assay
native	http://example.org/aopwiki-emod/Assay

LinkML Source

Direct

name: Assay
from_schema: http://example.org/aopwiki-emod
slots:
- created_at
- updated_at
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    identifier: true
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    - User
    range: integer
    required: true
  title:
    name: title
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - Citation
    - Assay
    - Profile
    - UrlLink
  description:
    name: description
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - AopLog
    - Assay
    - BatchImport
    - BiologicalObject
    - BiologicalProcess
    - CellTerm
    - Directness
    - EventLog
    - License
    - OecdStatus
    - OrganTerm
    - RelationshipLog
    - StressorLog
  citation_id:
    name: citation_id
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Assay
    - BatchImport
    - CitationBioTargetFamily
    - CitationRelationship
    - Evidence
    - ObservationCitation
  detection_technology:
    name: detection_technology
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Assay
  biological_action_id:
    name: biological_action_id
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Observation
    - Assay
    - EventComponent
    range: BiologicalAction
  external_assay_id:
    name: external_assay_id
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Assay
  batch_import_id:
    name: batch_import_id
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - BioTargetFamily
    - Observation
    - AopEvent
    - AssayBioTargetFamily
    - Assay
    - CitationBioTargetFamily
    - EventBioTargetFamily
    - HarmonizedAop
    - HarmonizedEvent
    - ObservationCitation
  objects:
    name: objects
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Assay
    range: BiologicalObject
    multivalued: true
  processes:
    name: processes
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Assay
    range: BiologicalProcess
    multivalued: true
  taxon_terms:
    name: taxon_terms
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Assay
    range: TaxonTerm
    multivalued: true
  events:
    name: events
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - BioTargetFamily
    - Observation
    - Assay
    - LifeStageTerm
    - SexTerm
    - TaxonTerm
    range: Event
    multivalued: true
  bio_target_families:
    name: bio_target_families
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Event
    - Citation
    - Assay
    range: AssayBioTargetFamily
    multivalued: true

Induced

name: Assay
from_schema: http://example.org/aopwiki-emod
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    identifier: true
    alias: id
    owner: Assay
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    - User
    range: integer
    required: true
  title:
    name: title
    from_schema: http://example.org/aopwiki-emod
    alias: title
    owner: Assay
    domain_of:
    - Aop
    - Event
    - Citation
    - Assay
    - Profile
    - UrlLink
    range: string
  description:
    name: description
    from_schema: http://example.org/aopwiki-emod
    alias: description
    owner: Assay
    domain_of:
    - AopLog
    - Assay
    - BatchImport
    - BiologicalObject
    - BiologicalProcess
    - CellTerm
    - Directness
    - EventLog
    - License
    - OecdStatus
    - OrganTerm
    - RelationshipLog
    - StressorLog
    range: string
  citation_id:
    name: citation_id
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: citation_id
    owner: Assay
    domain_of:
    - Assay
    - BatchImport
    - CitationBioTargetFamily
    - CitationRelationship
    - Evidence
    - ObservationCitation
    range: string
  detection_technology:
    name: detection_technology
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: detection_technology
    owner: Assay
    domain_of:
    - Assay
    range: string
  biological_action_id:
    name: biological_action_id
    from_schema: http://example.org/aopwiki-emod
    alias: biological_action_id
    owner: Assay
    domain_of:
    - Observation
    - Assay
    - EventComponent
    range: BiologicalAction
  external_assay_id:
    name: external_assay_id
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: external_assay_id
    owner: Assay
    domain_of:
    - Assay
    range: string
  batch_import_id:
    name: batch_import_id
    from_schema: http://example.org/aopwiki-emod
    alias: batch_import_id
    owner: Assay
    domain_of:
    - BioTargetFamily
    - Observation
    - AopEvent
    - AssayBioTargetFamily
    - Assay
    - CitationBioTargetFamily
    - EventBioTargetFamily
    - HarmonizedAop
    - HarmonizedEvent
    - ObservationCitation
    range: string
  objects:
    name: objects
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: objects
    owner: Assay
    domain_of:
    - Assay
    range: BiologicalObject
    multivalued: true
  processes:
    name: processes
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: processes
    owner: Assay
    domain_of:
    - Assay
    range: BiologicalProcess
    multivalued: true
  taxon_terms:
    name: taxon_terms
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: taxon_terms
    owner: Assay
    domain_of:
    - Assay
    range: TaxonTerm
    multivalued: true
  events:
    name: events
    from_schema: http://example.org/aopwiki-emod
    alias: events
    owner: Assay
    domain_of:
    - Aop
    - BioTargetFamily
    - Observation
    - Assay
    - LifeStageTerm
    - SexTerm
    - TaxonTerm
    range: Event
    multivalued: true
  bio_target_families:
    name: bio_target_families
    from_schema: http://example.org/aopwiki-emod
    alias: bio_target_families
    owner: Assay
    domain_of:
    - Event
    - Citation
    - Assay
    range: AssayBioTargetFamily
    multivalued: true
  created_at:
    name: created_at
    description: Timestamp of when the record was created
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: created_at
    owner: Assay
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    range: datetime
  updated_at:
    name: updated_at
    description: Timestamp of when the record was last updated
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: updated_at
    owner: Assay
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    range: datetime