Class: Event

URI: http://example.org/aopwiki-emod/Event

classDiagram class Event click Event href "../Event/" Event : aops Event --> "*" AopEvent : aops click AopEvent href "../AopEvent/" Event : assays Event --> "*" Assay : assays click Assay href "../Assay/" Event : bio_target_families Event --> "*" EventBioTargetFamily : bio_target_families click EventBioTargetFamily href "../EventBioTargetFamily/" Event : biological_organization_id Event --> "0..1" BiologicalOrganization : biological_organization_id click BiologicalOrganization href "../BiologicalOrganization/" Event : cell_term_id Event --> "0..1" CellTerm : cell_term_id click CellTerm href "../CellTerm/" Event : completion_score Event : created_at Event : definition Event : event_components Event --> "*" EventComponent : event_components click EventComponent href "../EventComponent/" Event : evidence_for_chemical_initiation Event : examples_using_ao Event : has_method_text Event : how_it_works Event : id Event : integration_score Event : life_stages Event --> "*" EventLifeStage : life_stages click EventLifeStage href "../EventLifeStage/" Event : measured_or_detected Event : observations Event --> "*" Observation : observations click Observation href "../Observation/" Event : organ_term_id Event --> "0..1" OrganTerm : organ_term_id click OrganTerm href "../OrganTerm/" Event : references Event : sexes Event --> "*" EventSex : sexes click EventSex href "../EventSex/" Event : short_name Event : supporting_tax_evidence Event : taxons Event --> "*" EventTaxon : taxons click EventTaxon href "../EventTaxon/" Event : title Event : updated_at

Slots

Name	Cardinality and Range	Description	Inheritance
created_at	0..1 Datetime	Timestamp of when the record was created	direct
updated_at	0..1 Datetime	Timestamp of when the record was last updated	direct
id	1 Integer		direct
title	0..1 String	A descriptive phrase which defines a discrete biological change that can be m...	direct
short_name	0..1 String	A reasonable abbreviation of the Key Event title, used in labelling throughou...	direct
biological_organization_id	0..1 BiologicalOrganization	The level of biological organization at which the Key Event occurs (e	direct
how_it_works	0..1 String	The mechanistic basis explaining how perturbation of this Key Event leads to ...	direct
measured_or_detected	0..1 String	A description of the type(s) of measurements that can be employed to evaluate...	direct
supporting_tax_evidence	0..1 String	Evidence describing the taxonomic applicability of the Key Event, using Latin...	direct
evidence_for_chemical_initiation	0..1 String	Documentation of how specific prototypical stressors (generally chemicals) ca...	direct
examples_using_ao	0..1 String	Examples illustrating the regulatory significance of this Key Event when it s...	direct
references	0..1 String	Literature cited in support of this Key Event description	direct
definition	0..1 String	A description of the biological state being observed or measured, the biologi...	direct
organ_term_id	0..1 OrganTerm	The organ or tissue in which the Key Event takes place	direct
cell_term_id	0..1 CellTerm	The cell type in which the Key Event takes place	direct
completion_score	0..1 String	Calculated metric indicating how complete the Key Event documentation is	direct
integration_score	0..1 String	Calculated metric for integration and priority assessment of the Key Event	direct
has_method_text	0..1 String	Indicates whether method text has been provided for this Key Event	direct
event_components	* EventComponent		direct
assays	* Assay		direct
observations	* Observation		direct
aops	* AopEvent		direct
life_stages	* EventLifeStage		direct
sexes	* EventSex		direct
bio_target_families	* EventBioTargetFamily		direct
taxons	* EventTaxon		direct

Usages

used by	used in	type	used
Relationship	upstream_event_id	range	Event
Relationship	downstream_event_id	range	Event
Observation	events	range	Event
AopEvent	event_id	range	Event
Assay	events	range	Event
EventLifeStage	event_id	range	Event
EventLog	event_id	range	Event
EventSex	event_id	range	Event
EventBioTargetFamily	event_id	range	Event
EventTaxon	event_id	range	Event
HarmonizedEvent	source_event_id	range	Event
HarmonizedEvent	harmonized_event_id	range	Event

Identifier and Mapping Information

Schema Source

from schema: http://example.org/aopwiki-emod

Mappings

Mapping Type	Mapped Value
self	http://example.org/aopwiki-emod/Event
native	http://example.org/aopwiki-emod/Event

LinkML Source

Direct

name: Event
from_schema: http://example.org/aopwiki-emod
slots:
- created_at
- updated_at
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    identifier: true
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    - User
    range: integer
    required: true
  title:
    name: title
    description: A descriptive phrase which defines a discrete biological change that
      can be measured.
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - Citation
    - Assay
    - Profile
    - UrlLink
  short_name:
    name: short_name
    description: A reasonable abbreviation of the Key Event title, used in labelling
      throughout AOP-Wiki.
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
  biological_organization_id:
    name: biological_organization_id
    description: The level of biological organization at which the Key Event occurs
      (e.g., molecular, cellular, tissue, organ, organism).
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    range: BiologicalOrganization
  how_it_works:
    name: how_it_works
    description: The mechanistic basis explaining how perturbation of this Key Event
      leads to downstream effects.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    - Relationship
  measured_or_detected:
    name: measured_or_detected
    description: A description of the type(s) of measurements that can be employed
      to evaluate the Key Event and the relative level of scientific confidence in
      those measurements.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
  supporting_tax_evidence:
    name: supporting_tax_evidence
    description: Evidence describing the taxonomic applicability of the Key Event,
      using Latin or common names of species or broader taxonomic groupings.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
  evidence_for_chemical_initiation:
    name: evidence_for_chemical_initiation
    description: Documentation of how specific prototypical stressors (generally chemicals)
      can trigger or perturb this Key Event.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
  examples_using_ao:
    name: examples_using_ao
    description: Examples illustrating the regulatory significance of this Key Event
      when it serves as an adverse outcome.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
  references:
    name: references
    description: Literature cited in support of this Key Event description.
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
  definition:
    name: definition
    description: A description of the biological state being observed or measured,
      the biological compartment in which it is measured, and its general role in
      the biology.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
  organ_term_id:
    name: organ_term_id
    description: The organ or tissue in which the Key Event takes place.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    range: OrganTerm
  cell_term_id:
    name: cell_term_id
    description: The cell type in which the Key Event takes place.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    range: CellTerm
  completion_score:
    name: completion_score
    description: Calculated metric indicating how complete the Key Event documentation
      is.
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - Relationship
  integration_score:
    name: integration_score
    description: Calculated metric for integration and priority assessment of the
      Key Event.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
  has_method_text:
    name: has_method_text
    description: Indicates whether method text has been provided for this Key Event.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
  event_components:
    name: event_components
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    range: EventComponent
    multivalued: true
  assays:
    name: assays
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    - BioTargetFamily
    range: Assay
    multivalued: true
  observations:
    name: observations
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    - Citation
    range: Observation
    multivalued: true
  aops:
    name: aops
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    - Relationship
    - Stressor
    - LifeStageTerm
    - SexTerm
    - TaxonTerm
    range: AopEvent
    multivalued: true
  life_stages:
    name: life_stages
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - Relationship
    range: EventLifeStage
    multivalued: true
  sexes:
    name: sexes
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - Relationship
    range: EventSex
    multivalued: true
  bio_target_families:
    name: bio_target_families
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    domain_of:
    - Event
    - Citation
    - Assay
    range: EventBioTargetFamily
    multivalued: true
  taxons:
    name: taxons
    from_schema: http://example.org/aopwiki-emod
    domain_of:
    - Aop
    - Event
    - Relationship
    range: EventTaxon
    multivalued: true

Induced

name: Event
from_schema: http://example.org/aopwiki-emod
attributes:
  id:
    name: id
    from_schema: http://example.org/aopwiki-emod
    identifier: true
    alias: id
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    - User
    range: integer
    required: true
  title:
    name: title
    description: A descriptive phrase which defines a discrete biological change that
      can be measured.
    from_schema: http://example.org/aopwiki-emod
    alias: title
    owner: Event
    domain_of:
    - Aop
    - Event
    - Citation
    - Assay
    - Profile
    - UrlLink
    range: string
  short_name:
    name: short_name
    description: A reasonable abbreviation of the Key Event title, used in labelling
      throughout AOP-Wiki.
    from_schema: http://example.org/aopwiki-emod
    alias: short_name
    owner: Event
    domain_of:
    - Aop
    - Event
    range: string
  biological_organization_id:
    name: biological_organization_id
    description: The level of biological organization at which the Key Event occurs
      (e.g., molecular, cellular, tissue, organ, organism).
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: biological_organization_id
    owner: Event
    domain_of:
    - Event
    range: BiologicalOrganization
  how_it_works:
    name: how_it_works
    description: The mechanistic basis explaining how perturbation of this Key Event
      leads to downstream effects.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: how_it_works
    owner: Event
    domain_of:
    - Event
    - Relationship
    range: string
  measured_or_detected:
    name: measured_or_detected
    description: A description of the type(s) of measurements that can be employed
      to evaluate the Key Event and the relative level of scientific confidence in
      those measurements.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: measured_or_detected
    owner: Event
    domain_of:
    - Event
    range: string
  supporting_tax_evidence:
    name: supporting_tax_evidence
    description: Evidence describing the taxonomic applicability of the Key Event,
      using Latin or common names of species or broader taxonomic groupings.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: supporting_tax_evidence
    owner: Event
    domain_of:
    - Event
    range: string
  evidence_for_chemical_initiation:
    name: evidence_for_chemical_initiation
    description: Documentation of how specific prototypical stressors (generally chemicals)
      can trigger or perturb this Key Event.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: evidence_for_chemical_initiation
    owner: Event
    domain_of:
    - Event
    range: string
  examples_using_ao:
    name: examples_using_ao
    description: Examples illustrating the regulatory significance of this Key Event
      when it serves as an adverse outcome.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: examples_using_ao
    owner: Event
    domain_of:
    - Event
    range: string
  references:
    name: references
    description: Literature cited in support of this Key Event description.
    from_schema: http://example.org/aopwiki-emod
    alias: references
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    range: string
  definition:
    name: definition
    description: A description of the biological state being observed or measured,
      the biological compartment in which it is measured, and its general role in
      the biology.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: definition
    owner: Event
    domain_of:
    - Event
    range: string
  organ_term_id:
    name: organ_term_id
    description: The organ or tissue in which the Key Event takes place.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: organ_term_id
    owner: Event
    domain_of:
    - Event
    range: OrganTerm
  cell_term_id:
    name: cell_term_id
    description: The cell type in which the Key Event takes place.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: cell_term_id
    owner: Event
    domain_of:
    - Event
    range: CellTerm
  completion_score:
    name: completion_score
    description: Calculated metric indicating how complete the Key Event documentation
      is.
    from_schema: http://example.org/aopwiki-emod
    alias: completion_score
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    range: string
  integration_score:
    name: integration_score
    description: Calculated metric for integration and priority assessment of the
      Key Event.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: integration_score
    owner: Event
    domain_of:
    - Event
    range: string
  has_method_text:
    name: has_method_text
    description: Indicates whether method text has been provided for this Key Event.
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: has_method_text
    owner: Event
    domain_of:
    - Event
    range: string
  event_components:
    name: event_components
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: event_components
    owner: Event
    domain_of:
    - Event
    range: EventComponent
    multivalued: true
  assays:
    name: assays
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: assays
    owner: Event
    domain_of:
    - Event
    - BioTargetFamily
    range: Assay
    multivalued: true
  observations:
    name: observations
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: observations
    owner: Event
    domain_of:
    - Event
    - Citation
    range: Observation
    multivalued: true
  aops:
    name: aops
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: aops
    owner: Event
    domain_of:
    - Event
    - Relationship
    - Stressor
    - LifeStageTerm
    - SexTerm
    - TaxonTerm
    range: AopEvent
    multivalued: true
  life_stages:
    name: life_stages
    from_schema: http://example.org/aopwiki-emod
    alias: life_stages
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    range: EventLifeStage
    multivalued: true
  sexes:
    name: sexes
    from_schema: http://example.org/aopwiki-emod
    alias: sexes
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    range: EventSex
    multivalued: true
  bio_target_families:
    name: bio_target_families
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: bio_target_families
    owner: Event
    domain_of:
    - Event
    - Citation
    - Assay
    range: EventBioTargetFamily
    multivalued: true
  taxons:
    name: taxons
    from_schema: http://example.org/aopwiki-emod
    alias: taxons
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    range: EventTaxon
    multivalued: true
  created_at:
    name: created_at
    description: Timestamp of when the record was created
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: created_at
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    range: datetime
  updated_at:
    name: updated_at
    description: Timestamp of when the record was last updated
    from_schema: http://example.org/aopwiki-emod
    rank: 1000
    alias: updated_at
    owner: Event
    domain_of:
    - Aop
    - Event
    - Relationship
    - Stressor
    - BioTargetFamily
    - Observation
    - Citation
    - AopEvent
    - AopLifeStage
    - AopLog
    - AopRelationship
    - AopSex
    - AopStressor
    - AopTaxon
    - AssayBioTargetFamily
    - Assay
    - AssignedLicense
    - BatchImport
    - BiologicalAction
    - BiologicalObject
    - BiologicalOrganization
    - BiologicalProcess
    - CellTerm
    - ChemicalSynonym
    - Chemical
    - CitationBioTargetFamily
    - CitationRelationship
    - ConfidenceLevel
    - Directness
    - EventLifeStage
    - EventLog
    - EventSex
    - EventBioTargetFamily
    - EventTaxon
    - Evidence
    - ExperimentType
    - Handbook
    - HarmonizedAop
    - HarmonizedEvent
    - License
    - LifeStageTerm
    - ObservationCitation
    - OecdStatus
    - OrganTerm
    - Profile
    - RelationshipLifeStage
    - RelationshipLog
    - RelationshipSex
    - RelationshipTaxon
    - SexTerm
    - StressorChemical
    - StressorLog
    - EventComponent
    - TaxonTerm
    - UrlLink
    range: datetime