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Slot: evidence

Evidence items backing this object's claims. Each one carries an exact quote from a cited publication.

URI: soma:evidence Alias: evidence

Applicable Classes

Name Description Modifies Slot
GobletCellOutput Measurement results from a goblet cell assay no
OxidativeStressOutput Measurement results from an oxidative stress assay no
FoxJExpressionAssay Assay for measuring FoxJ1 expression related to ciliogenesis no
CFTRFunctionOutput Measurement results from a CFTR function assay no
LungFunctionOutput Measurement results from a lung function assay no
MolecularInitiatingEvent The initial molecular-level perturbation that starts an Adverse Outcome Pathw... no
MucociliaryClearanceAssay Assay for measuring mucociliary clearance and transport no
OxidativeStressAssay Assay for measuring oxidative stress markers no
GobletCellAssay Assay for measuring goblet cell populations and mucin production no
EGFRSignalingAssay Assay for measuring EGFR phosphorylation and downstream signaling no
GeneExpressionAssay General assay for gene expression measurements no
LungFunctionAssay Clinical assay for measuring lung function no
ASLAssay Assay for measuring airway surface liquid properties including ASL height, pe... no
CFTRFunctionAssay Assay for measuring CFTR (Cystic Fibrosis Transmembrane Conductance Regulator... no
AssayOutputMeasurement The measurement results produced by an assay no
KeyEvent A measurable change in biological state that is a step in an Adverse Outcome ... no
EGFRSignalingOutput Measurement results from an EGFR signaling assay no
MucociliaryClearanceOutput Measurement results from a mucociliary clearance assay no
ASLOutput Measurement results from an airway surface liquid assay no
BALFSputumOutput Measurement results from a BALF/sputum assay no
FoxJExpressionOutput Measurement results from a FoxJ1 expression assay no
GeneExpressionOutput Measurement results from a gene expression assay no
Assay A planned process with the objective to produce information about biological ... no
KeyEventRelationship A directional relationship between two key events in an AOP no
CiliaryFunctionAssay Assay for measuring ciliary function including beat frequency, active area, c... no
CiliaryFunctionOutput Measurement results from a ciliary function assay no
BALFSputumAssay Assay for measuring bronchoalveolar lavage fluid (BALF) or sputum composition no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type Mapped Value
self soma:evidence
native soma:evidence

LinkML Source

name: evidence
description: Evidence items backing this object's claims. Each one carries an exact
  quote from a cited publication.
from_schema: https://w3id.org/EHS-Data-Standards/soma
rank: 1000
alias: evidence
domain_of:
- KeyEvent
- KeyEventRelationship
- Assay
- AssayOutputMeasurement
range: EvidenceItem
recommended: true
multivalued: true
inlined: true
inlined_as_list: true