Skip to content

Slot: description

A detailed description of the entity.

URI: schema:description Alias: description

Applicable Classes

Name Description Modifies Slot
CFTRFunctionOutput Measurement results from a CFTR function assay no
LungFunctionAssay Clinical assay for measuring lung function no
FoxJExpressionOutput Measurement results from a FoxJ1 expression assay no
AdverseOutcomePathway A sequence of causally linked events at different levels of biological organi... no
OxidativeStressOutput Measurement results from an oxidative stress assay no
MucociliaryClearanceOutput Measurement results from a mucociliary clearance assay no
KeyEvent A measurable change in biological state that is a step in an Adverse Outcome ... no
GobletCellAssay Assay for measuring goblet cell populations and mucin production no
GeneExpressionAssay General assay for gene expression measurements no
GobletCellOutput Measurement results from a goblet cell assay no
Protocol A detailed set of steps for how to perform a specific assay no
EGFRSignalingAssay Assay for measuring EGFR phosphorylation and downstream signaling no
FoxJExpressionAssay Assay for measuring FoxJ1 expression related to ciliogenesis no
InVivoSubject A living human or animal subject from whom measurements are taken no
MolecularInitiatingEvent The initial molecular-level perturbation that starts an Adverse Outcome Pathw... no
GeneExpressionOutput Measurement results from a gene expression assay no
MucociliaryClearanceAssay Assay for measuring mucociliary clearance and transport no
CFTRFunctionAssay Assay for measuring CFTR (Cystic Fibrosis Transmembrane Conductance Regulator... no
BALFSputumOutput Measurement results from a BALF/sputum assay no
CiliaryFunctionAssay Assay for measuring ciliary function including beat frequency, active area, c... no
KeyEventRelationship A directional relationship between two key events in an AOP no
CellularSystem Cell-based model systems that use living cells to model biological processes no
MolecularAssayProtocol Protocol for molecular biology assays (qRT-PCR, Western blot, ELISA) no
AdverseOutcome A specialized type of key event that represents the apical endpoint of an Adv... no
SpirometryProtocol Protocol for lung function / spirometry assays no
StainingProtocol Protocol for staining-based assays (goblet cell, immunofluorescence) no
NamedThing A generic entity with an identifier and name no
ModelSystem An in vitro or ex vivo model system used to study biological processes no
AssayOutputMeasurement The measurement results produced by an assay no
ASLOutput Measurement results from an airway surface liquid assay no
PopulationSubject A population or cohort of subjects studied in aggregate no
EGFRSignalingOutput Measurement results from an EGFR signaling assay no
LungFunctionOutput Measurement results from a lung function assay no
ASLAssay Assay for measuring airway surface liquid properties including ASL height, pe... no
CiliaryFunctionOutput Measurement results from a ciliary function assay no
ImagingProtocol Protocol for imaging-based assays (CBF, ASL, MCC) no
OxidativeStressAssay Assay for measuring oxidative stress markers no
Assay A planned process with the objective to produce information about biological ... no
BALFSputumAssay Assay for measuring bronchoalveolar lavage fluid (BALF) or sputum composition no
StudySubject The subject of a study — what the assay is performed on no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/EHS-Data-Standards/soma

Mappings

Mapping Type Mapped Value
self schema:description
native soma:description

LinkML Source

name: description
description: A detailed description of the entity.
from_schema: https://w3id.org/EHS-Data-Standards/soma
rank: 1000
slot_uri: schema:description
alias: description
domain_of:
- NamedThing
range: string